| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4822 |
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| Symbol | |
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| ID | 5606065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 5340226 |
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| End bp | 5342511 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640940395 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_001481043 |
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| Protein GI | 157373054 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000381072 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGCAT TACTGGTAGA AAGCGAGTTT ACAACACCGG GCGGTTACCC CACCGCCGCC
ATTGGACGCC TGATTGAGCA GTTGAATGGC CGTGATGTTG AAGTCATGCG CGCCACTTCT
TTGCAGGACG GTGAGTCCAT TATTGACGCT AACGAACCCA TTGATTGTCT GCTGCTGGCC
CGCAGCATGC CTGATAAGAA AGCAGCCGAT CCCGCACAGA AATTATTGGA TAAACTGCAT
GAGCGCCAAG AAAATGCACC AGTGTTTCTG CTGAGCGACC GCGGCACCGT CACCAAAGAA
CTCAGCCTCG ACATGATGGA ACAAATCAGT GAGTTCGCCT GGATCCTGGA AGACTCGGCT
GATTTTATCG CCGGGCGCAT TATGGCCGCC ATTAGACGCT ATCGGCAGCT GCTACTGCCG
CCGCTGATGT CGGCCATAAT GAAATACAAC CAGACCCATG AATATTCCTG GGCGGTGCCA
GGGCACCAGG GCGGGGTCGG CTTTACCAAA ACGCCGGCCG GCCGCGTATT TCACGATTTC
TATGGCGAGA ACCTGTTTCG TACCGATTCA GGCATCGAGC GAACCGCGCT GGGCTCATTG
CTGGATCACA CCGGCTCTTT CAAAGACAGC GAAACAAATA TTGCCCGCGT GTTTGGCGCT
GAAAAATCCT ATTCCGGCGT GGTGGGTACC TCTGGCTCCA ATCGCAGCGT GATGCAGGCC
TGCTTAACCG AAGATCGTGG GGCGGTGGTT GACCGCAACT GCCATAAATC GATCGAGCAG
GGGCTGATCC TCACCGGTGC TACACCGACC TACATGATCC CCAGCCGCAA CCCTTATGGG
ATTATCGGCC CGGTGCCAAA ATCAGAGATG CTCCCTGATA CCATAAAGAC TAAAATGGAT
GAAAATCCAC TTGGCATCAC ATCAATAGAT TACTTTGTAT TAACCAACTG CACTTATGAC
GGTATTTGCT ATAACGCGGC AGAGGTAGTA AACGTTATCG AGGGTAAGGG GACTTTTATC
CCAGTAGTTC ACTTCGATGA AGCCTGGTAC GGCTATGCAC GCTTTAACCC GATGTATAAC
AACTACTTTG CTATGCGCGG CGACCCAAAA GATCATACCT CGGATTTATC AACGGTCGTC
GCTACCCAGT CCAGCCATAA AATGCTCAAT GCGCTGTCAC CCGCCTCATA TATCCATATC
CGTAACGGTA AGAAACCCTT AGATTTCCCA CGCTTTAACC AAGCCTATAT GATGCACACC
ACCACCTCAC CGTCTTATAT CATTGCCGCG TCTAACGACA TTGCCGCAAA TATGATGGAT
GGCGAATCAG GCCAATCGCT GACCCAAGAG GCCATCAATG AAGCAGTGGA CTTCCGTCAG
GCATTAGCCC GTCTGCATAC TGAATTCAAG GCGAAGGAAG AGTGGTTCTT TAAACCCTGG
AATATCGAAA AAGGTCGCAA ACCCGGGGAA GAAAAAGACG TCCCATTCCA AGATATCCCC
GCAGAGGCTC TGGCTACCGA TCAAAGCTAC TGGGTGATGA AGCCAGAAGA TAAGTGGCAT
GGTTTCAAAA ATCTCGACGC GGATTGGGCA ATGATCGACC CGGTCAAAGT CAGCATCCTG
GCTCCAGGCA TTAAAGTGGA CGGTACGCTG GAAGATACCG GGGTACCGGC AGCATTGGTT
AATGCCTGGT TAGCCCGCAA CGGCATTGTG CCAACCCGCA CCACCGACTT CCAACTGATG
TTCCTGTTCT CTATGGGGGT GACCAAAGGG AAATGGGGTA CCCTACTGGA AGCGCTGCTG
TCCTTTAAAC GTCATTATGA CGCCAACACC CCGCTGTCCG AAGTGCTGCC GGATCTCGCC
GCAAAATACA GCGCGGAGTA TGGCGCCCTG GGCCTGAAAG ATCTCGGCGA TAAGATGTTT
GCCTTCCTGA AACAAGATGA CCTCGGCAAG TTGCTTAACC AGGCCTATGA CGCTCTGCCA
ACACCGGTAT TAACACCGCG TGCCGCGTAC CAAAAACTGG TTCGCTACGA CGTTGAACCG
GTCAGCCTTA AGGACCTGCA TGGCAGGATA GCAGCCAATG CGGTTCTTCC TTACCCACCC
GGCATTCCTA TGCTGATGTC CGGTGAGAAG TTCGGTGAAC GCGTGGGCGA CAAGGAAAGT
GCGCAAATTG CCTACCTGCT CGCATTGCAA AAATGGGATG ACACCTTCGC AGGGTTTGAA
CACGAAACCG CAGGTATTAC CATTACCGAT AAGGGCGAGT ACCAGGTGTT GTGTATTAAA
TCCTAA
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| Protein sequence | MKALLVESEF TTPGGYPTAA IGRLIEQLNG RDVEVMRATS LQDGESIIDA NEPIDCLLLA
RSMPDKKAAD PAQKLLDKLH ERQENAPVFL LSDRGTVTKE LSLDMMEQIS EFAWILEDSA
DFIAGRIMAA IRRYRQLLLP PLMSAIMKYN QTHEYSWAVP GHQGGVGFTK TPAGRVFHDF
YGENLFRTDS GIERTALGSL LDHTGSFKDS ETNIARVFGA EKSYSGVVGT SGSNRSVMQA
CLTEDRGAVV DRNCHKSIEQ GLILTGATPT YMIPSRNPYG IIGPVPKSEM LPDTIKTKMD
ENPLGITSID YFVLTNCTYD GICYNAAEVV NVIEGKGTFI PVVHFDEAWY GYARFNPMYN
NYFAMRGDPK DHTSDLSTVV ATQSSHKMLN ALSPASYIHI RNGKKPLDFP RFNQAYMMHT
TTSPSYIIAA SNDIAANMMD GESGQSLTQE AINEAVDFRQ ALARLHTEFK AKEEWFFKPW
NIEKGRKPGE EKDVPFQDIP AEALATDQSY WVMKPEDKWH GFKNLDADWA MIDPVKVSIL
APGIKVDGTL EDTGVPAALV NAWLARNGIV PTRTTDFQLM FLFSMGVTKG KWGTLLEALL
SFKRHYDANT PLSEVLPDLA AKYSAEYGAL GLKDLGDKMF AFLKQDDLGK LLNQAYDALP
TPVLTPRAAY QKLVRYDVEP VSLKDLHGRI AANAVLPYPP GIPMLMSGEK FGERVGDKES
AQIAYLLALQ KWDDTFAGFE HETAGITITD KGEYQVLCIK S
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