| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4801 |
|---|
| Symbol | |
|---|
| ID | 5605423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 5321442 |
|---|
| End bp | 5322065 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640940374 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_001481022 |
|---|
| Protein GI | 157373033 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2345] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000472031 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAA CAGAGCTGAT TTTATTGCAG TTAAAAACCT TGGGGCCGCA CTCTGCCAAA
ATGCTGGCTG AGCGTCTGGA CATCACCCCC ATGGGTATCC GTCAGCATCT GCAATCTCTG
GAAAAACGTG AGCTGGTGGG TTACGAGGAA GCGCGTACCA AGGTAGGTCG CCCCACACGC
TACTGGTCGC TGACCCAGCA GGGCCACGCC CAGTTTGCCA ACGGCCACGA TCGGCTGGCG
ACAGAGCTGT TGGGATCCGC CCATCAGTTG TTTGGGGCGG AAGGGGTGGA GCAGTTGCTC
AGCGCGCGCG AAGACAAGCT TTATCAGCGC TATGCTGAAG AACTGTCTGA GGAAGACTGC
CATCAGGCCA AACTCGCCCG ATTGGTGCGC CTGCGGCAGC ATGATGGCTA CATGGCCGAA
CTGTTAGAGC ACCCGCAGGG CATGCTACTG GTGGAAAACC ACTGCCCAAT CGGCGTGGCG
GCCACCGCCT GCAGCAGCCT GTGCAACTCG GAGCTGCAAC TGTTTAACCG TCTGTTTGGC
CAGGGTTATC GCATAGAGCG TACTGCGCAT GCTATTTCCG GCTCACGACA TTGCGCTTAT
TTGATTCGAC CATTGGAGCT TTAG
|
|---|
| Protein sequence | MKTTELILLQ LKTLGPHSAK MLAERLDITP MGIRQHLQSL EKRELVGYEE ARTKVGRPTR
YWSLTQQGHA QFANGHDRLA TELLGSAHQL FGAEGVEQLL SAREDKLYQR YAEELSEEDC
HQAKLARLVR LRQHDGYMAE LLEHPQGMLL VENHCPIGVA ATACSSLCNS ELQLFNRLFG
QGYRIERTAH AISGSRHCAY LIRPLEL
|
|---|
| |