| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4800 |
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| Symbol | emrD |
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| ID | 5605198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 5319961 |
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| End bp | 5321145 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640940373 |
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| Product | multidrug resistance protein D |
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| Protein accession | YP_001481021 |
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| Protein GI | 157373032 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000558719 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAAAAA TAGAAAACTT TCACCTGTTG GTGATGCTTA CCCTGTTAGT GGCCGTCGGT
CAGATGGCAC AAACCATTTA TGTCCCCGTG ATTGCTGATA TTGCCAAGGA TCTGTCGGTG
CGCTCCGGTG CCGTGCAGCG CGTGATGGCG GCTTATCTGA TGACCTATGG CTTCTCGCAG
TTGATTTACG GCCCGCTGTC GGACCGTATT GGCCGTCGGC CGGTGATCCT GGCCGGGATG
ATGATTTTTA TGATGGGTGC GCTTGGCGCG CTGCTGTCCA CCAACCTGAC GATGCTGGTT
GCCGCCAGTG CCATTCAGGG GATGGGGACC GGCGTGGCGG GGGTGATGGC GCGAACCATG
CCGCGTGACC TGTATGCCGG TACTTCGCTG CGCTATGCCA ACAGCCTGCT CAACATGGGC
ATTCTGGTCA GTCCGCTGTT GGCACCGATC ATCGGTGGGG CATTGGCGAT GATATTTGGC
TGGCGCGCCT GTTATGCCTT CCTGTTGGTG TTGTGCGCCG GCGTGGCCTT CGCCATGTTC
CGCTGGCTGC CGGAAACCCG ACCGCAGCAG ACCGAAAAAC GGCGCATGCT GGCAAGCTTC
CGCAAGCTGC TGGCGGACAG CACTTTCAGC TGTTATCTGG TGATGCTGAT CGGTGCTCTG
GCGGGGATCG CGGTCTTTGA AGCCAGCTGC GGCGTGCTGA TGGGCGGCGT ACTCGGCCTT
AGCGGACTGA CCGTCAGTAT CCTGTTTATT CTGCCAATCC CGGCGGCGTT CTTTGGTGCC
TGGTATGCCG GTCGTGACGG CAAAAGCTTC CACAGTCTGG TGTGGCATTC GGTGATCAGT
TGCCTGTTGG CGGGCCTGAT GATGTGGATC CCCGGGTGGT TTGGCGTGAT GAATATCTGG
ACGCTGATTG TGCCGGCTGC GCTGTTCTTC TTCGGTGCCG GGATGTTATT CCCGCTGGCC
ACTACCGGGG CGATGGAGCC GTTTCCTTAT CTGGCCGGTG CGGCCGGCGC ATTGGTCGGG
GGCATGCAGA ACATGGGCTC CGGCCTGGCG ACCTGGCTTT CCGCCATGCT GCCGCAGACC
GGGCAGTTCA GCCTCGGCCT GCTGATGTTT GCCATGGCAT TACTGATTTT GCTGTGCTGG
TGGCCGTTAT CGCATCGGAT GCAGCATCAG GGACATACCG TATAA
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| Protein sequence | MRKIENFHLL VMLTLLVAVG QMAQTIYVPV IADIAKDLSV RSGAVQRVMA AYLMTYGFSQ
LIYGPLSDRI GRRPVILAGM MIFMMGALGA LLSTNLTMLV AASAIQGMGT GVAGVMARTM
PRDLYAGTSL RYANSLLNMG ILVSPLLAPI IGGALAMIFG WRACYAFLLV LCAGVAFAMF
RWLPETRPQQ TEKRRMLASF RKLLADSTFS CYLVMLIGAL AGIAVFEASC GVLMGGVLGL
SGLTVSILFI LPIPAAFFGA WYAGRDGKSF HSLVWHSVIS CLLAGLMMWI PGWFGVMNIW
TLIVPAALFF FGAGMLFPLA TTGAMEPFPY LAGAAGALVG GMQNMGSGLA TWLSAMLPQT
GQFSLGLLMF AMALLILLCW WPLSHRMQHQ GHTV
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