| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4797 |
|---|
| Symbol | |
|---|
| ID | 5605192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 5316390 |
|---|
| End bp | 5317235 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640940370 |
|---|
| Product | MIP family channel protein |
|---|
| Protein accession | YP_001481018 |
|---|
| Protein GI | 157373029 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000240891 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAA CCACCAGTCC GACCCTAAAA GGCCAATGTA TCGCCGAGTT TCTCGGCACC
GGCCTGTTGA TATTTTTTGG CGTAGGCTGC GTTGCCGCGT TGAAACTGGC TGGCGCCAGC
TTCGGCCAGT GGGAAATCAG TATCATTTGG GGCCTGGGCG TTGCCATGGC CATCTATCTG
ACCGCTGCCA TCTCTGGTGC GCATCTCAAC CCGGCAGTCA CCATCGCACT GTGGCTGTTC
GCCTGCTTTG ACGGACGCAA AGTATTGCCT TACATCGTCG CGCAGATCGC CGGAGCCTTC
TGCGCCGCAG CGCTGGTCTA CGGGCTGTAT TACAACCTGT TCTTCGATTT TGAAGCGGCC
AACCATATGG TACGTGGCAG CGACGAAAGC CTGGCCCTGG CCGGCATCTT CTCCACCTAC
CCTAATGCAC ACATCTCCGT GGGTCAGGCT TTCCTGGTTG AAACGGTGAT TACCGCGATC
CTGATGTGCC TGATCCTGGC GCTGACCGAC GACGGCAACG GCATTCCACG TGGCCCGCTG
GCACCGCTGT TAATCGGTAT TCTGATTGCC GTGATCGGCG CCTCTATGGG ACCATTGACC
GGCTTTGCGC TGAACCCGGC CCGTGACTTC GGTCCGAAAA TGTTCGCTTA TCTGGCCGGC
TGGGGCAAAG TGGCCTTCAC CGGTGCGCGT GATATCCCGT ACTTCCTGGT GCCAATCTTT
GGCCCAATCA TCGGTGCCTG CCTGGGTGCC TTCGGCTACC GCATGCTCAT TGGCCGCAAT
CTGCCGTGTG ACGTTTGCGT AGAAGAAGAA AAACCCGCCG CCAAGGCTCA GCAGCGTAAA
GCATGA
|
|---|
| Protein sequence | MSQTTSPTLK GQCIAEFLGT GLLIFFGVGC VAALKLAGAS FGQWEISIIW GLGVAMAIYL
TAAISGAHLN PAVTIALWLF ACFDGRKVLP YIVAQIAGAF CAAALVYGLY YNLFFDFEAA
NHMVRGSDES LALAGIFSTY PNAHISVGQA FLVETVITAI LMCLILALTD DGNGIPRGPL
APLLIGILIA VIGASMGPLT GFALNPARDF GPKMFAYLAG WGKVAFTGAR DIPYFLVPIF
GPIIGACLGA FGYRMLIGRN LPCDVCVEEE KPAAKAQQRK A
|
|---|
| |