| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4790 |
|---|
| Symbol | |
|---|
| ID | 5604976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 5309965 |
|---|
| End bp | 5310993 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640940363 |
|---|
| Product | DNA-binding transcriptional regulator CytR |
|---|
| Protein accession | YP_001481011 |
|---|
| Protein GI | 157373022 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000120208 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGAACACA AGAAAGAATT ATCCATGGCA ACCATGAAAG ACGTTGCCGA AATGGCGGGC
GTTTCAACGG CAACCGTGTC GCGTGCGCTG ATGAACCCGG AAAAGGTGTC AACGCCGACG
CGTCAGAAAG TGGAACAGGC CGTACTGGCC GTGGGCTATT CTCCTCATGC CCTCTCTCGC
AATATCAAGC GTAACGAATC CCGGACTATC CTGGTGATCG TCCCCGACAT TTGCGATCCG
TTTTTCGCCG ATGTGATCCA GGGGATCGAG CAAACCGCCG CACAACAGGG CTACCTGGTG
CTGATTGGTG ACTGTGCTCA GCAAAACCAG CAGGAACGCA CCTTCGTCAA CCTGATCATT
ACCAAACAAA TCGATGGCAT GCTGCTGCTC GGCTCCAACC TGCCGTTCGA TGCCAGCAAG
GAAGAGCAGC GTAACCTGCC GCCGATGGTG ATGGCCAACG AGTTTGCTCC GGAGCTGGAA
CTGCCGACGG TGCACATCGA TAACCTGACC GCCGCCTTCG AAGCCGTGCA TTATTTACAT
CAGCTCGGCC ACCAGCAAAT CGCCTGTGTC GCCGGGCCGG AACAGATGCC GCTCAGCCAT
TATCGCCTGC AAGGTTACAT TCAGGCGCTA CGTCGTAATG GCATTACCGT CGAAAGCAGC
TATATTACCC GGGGTGATTT CACCTACGAG GCTGGCGCTC AGGCGCTGGC AACGTTGATG
GCACAGCCAA AACCGCCGAC GGCAGTGTTC TGCCACAGTG ATGTGATGGC CATTGGCGTG
CTGTCGCAGG CGAAAAAGAT GGGGCTGCGG GTACCGCAGG ACCTTTCTAT CATCGGCTTT
GACGACATCA AACTGGCGCA GTATTGCGAT CCACCGTTAA CCACAGTGGC TCAACCGCGC
TACCAGATTG GCCAGCAGGC CATGTTATTG CTGTTGGAGC AGCTACACGG GCAGACCGTG
GCAAGCGGCT CCCGGCTATT GGACAGTGAA TTGATTATCA GAGGCAGCAC CGCTGCCCCG
AAACGCTAG
|
|---|
| Protein sequence | MEHKKELSMA TMKDVAEMAG VSTATVSRAL MNPEKVSTPT RQKVEQAVLA VGYSPHALSR
NIKRNESRTI LVIVPDICDP FFADVIQGIE QTAAQQGYLV LIGDCAQQNQ QERTFVNLII
TKQIDGMLLL GSNLPFDASK EEQRNLPPMV MANEFAPELE LPTVHIDNLT AAFEAVHYLH
QLGHQQIACV AGPEQMPLSH YRLQGYIQAL RRNGITVESS YITRGDFTYE AGAQALATLM
AQPKPPTAVF CHSDVMAIGV LSQAKKMGLR VPQDLSIIGF DDIKLAQYCD PPLTTVAQPR
YQIGQQAMLL LLEQLHGQTV ASGSRLLDSE LIIRGSTAAP KR
|
|---|
| |