Gene Spro_4779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4779 
Symbol 
ID5604671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5294214 
End bp5295434 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content57% 
IMG OID640940352 
Productargininosuccinate synthase 
Protein accessionYP_001481000 
Protein GI157373011 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00402 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAACC AAGGCATCAA AAAAATCGTT CTGGCGTACT CTGGCGGTCT GGATACTTCG 
GCCATCATTC CCTGGCTGAA AGAAAACTAC GGCGGCTGCG AAGTGGTAGC CTTCGTGGCG
GATATCGGCC AGGAGCGCAG CGATCTGGAA GGTGTGGAGC AAAAAGCCCT GCAATCCGGT
GCCTCTGAGT GCCACGTGGT TGATCTGCGG GAAGAATTCA TCCGTGATTA CGTTTACCCG
GTACTGCAGA CCGGCGCCCT GTATGAAGGC AGCTACCTGC TGGGCACCTC CATGGCGCGC
CCGATTATCG CTAAAGCGCA GGTTGAACTG GCGCTGAAAG TGGGTGCTGA CGCGGTGTGC
CACGGCGCAA CCGGTAAAGG TAATGACCAG GTGCGTTTCG AAACCACCTA TACCGCACTG
GCCCCACATC TGAAAGTGGT TGCTCCTTGG CGTGAGTGGA ACCTGCGTTC CCGTGAAGCG
CTGCTGGACT ACCTGAAAGA GCGCAACATC CCGACCACCG CGTCGCTGGA AAAAATCTAC
AGCCGTGACG AGAATGCCTG GCATATCTCT ACCGAAGGCG GCGTGCTGGA AAGCCCGTGG
AACGCACCGA ACAAAGACTG CTGGGTCTGG ACTGTCGATC CGCAGGAAGC GCCGGATCAG
CCTGAGCAAG TGACCATCAC CGTAGAGAAA GGCTGCGTAG TGGCGGTTAA CGGTGAAGCT
CTTAGCCCGT ACAAATGTCT GGAAACCCTG AACGTGCTGG GTGCCAAGCA TGGCGTGGGC
CGTATCGATA TCGTAGAAAA CCGTCTGGTA GGCATCAAAT CCCGCGGCTG CTACGAAACC
CCGGGCGGCA CCATTATGGT GGCGGCACTG CGTGGCGTTG AACAGCTGGT GCTGGATCGC
GACAGTTTCA AATGGCGTGA GCAACTGGGC CTGGAAATGT CTTACGTGGT ATACGATGGC
CGTTGGTTTG CTCCACTGCG TCGTTCACTG CAGGCTTCCG CCGAAGCGCT GGCCGAAGAG
GTTAACGGTG AAGTGGTGCT GCAGCTGTAT AAAGGCCAGG TGACGGCGAT TCAGAAAAAA
TCCGCCAACA GCCTGTACTC CGAAGAGTTC GCGACCTTCG GCGAAGACGA AGTTTACGAT
CACAGCCACG CGGGCGGTTT TATCCGTCTG TTCTCACTCT CTTCACGCAT TCGCGCGCTG
AACGAGATCA AGAACAAGTA A
 
Protein sequence
MQNQGIKKIV LAYSGGLDTS AIIPWLKENY GGCEVVAFVA DIGQERSDLE GVEQKALQSG 
ASECHVVDLR EEFIRDYVYP VLQTGALYEG SYLLGTSMAR PIIAKAQVEL ALKVGADAVC
HGATGKGNDQ VRFETTYTAL APHLKVVAPW REWNLRSREA LLDYLKERNI PTTASLEKIY
SRDENAWHIS TEGGVLESPW NAPNKDCWVW TVDPQEAPDQ PEQVTITVEK GCVVAVNGEA
LSPYKCLETL NVLGAKHGVG RIDIVENRLV GIKSRGCYET PGGTIMVAAL RGVEQLVLDR
DSFKWREQLG LEMSYVVYDG RWFAPLRRSL QASAEALAEE VNGEVVLQLY KGQVTAIQKK
SANSLYSEEF ATFGEDEVYD HSHAGGFIRL FSLSSRIRAL NEIKNK