Gene Spro_4770 details

Gene Information

• Locus tag: Spro_4770
• Symbol: btuB
• ID: 5604606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Serratia proteamaculans 568
• Kingdom: Bacteria
• Replicon accession: NC_009832
• Strand: -
• Start bp: 5283340
• End bp: 5285211
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640940343
• Product: vitamin B12/cobalamin outer membrane transporter
• Protein accession: YP_001480991
• Protein GI: 157373002
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein
• TIGRFAM ID: [TIGR01779] TonB-dependent vitamin B12 receptor

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000262019
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.0314633
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACAATTA CAAAAAATAC ACTGCTGGCG GTGGTTTCTT CCATCACGGC TTTTTCTGGA 
TGGGCGCAAG ACAACACCAC AGCCAATAAC AGCGATGACC TGGTGGTTTC CGCCAACCGT 
TTTCCGCAGC CGGTTTCTTC CGTGCTGGCA CCCACCTCTG TCGTTACCCG TGACGAAATC 
GACCGCTGGC AGGCAAAAAG CCTGACCGAT GTGATGCGCC GCCTGCCGGG GGTGGATGTT 
GGGCAGAATG GTGGCCTGGG ACAAAAAAGC TCGCTGTTTA TCCGCGGTAC CAACTCCAGC 
CATGTCCTGG TGCTGATCGA CGGTATTCGC CTTAACCAGG CCGGCATCAG TGGTTCCTCC 
GACCTCAGCC AGATCCCGAT TTCGCTGGTG CAGAAAGTCG AATATATTCG CGGACCGCGT 
TCGGCTGTCT ATGGTTCCGA TGCCATCGGT GGCGTGGTGA ACATTATTAC CACCCGTGAA 
AAGAACGGCA CTACGCTTTC TGCCGGTATG GGTTCAAACG GCTATCAGGC CTATGACGCT 
TCCACTCAGC AACAGTTGGG CGACAGCACG GTGGCGACGC TCGCCGGCAA CTATACCTAT 
ACCAAAGGCT ATGATGTAGT GGCTTACGGC AGTACCGGTA TGCAGAGCCA GCAGGATCGC 
GATGGCTACA TGAGTAAAGC GCTGTACGGC GCTGTTGACC ATCAGTTCAA TGAGGCCATT 
AGCGGCTTTG TGCGTGGTTA TGGTTATGAC AACCGTACGG CTTACGATGC TTATTATTCC 
TCCCCGACCA GCCCACTGGT AGATACCCGC AAGCTGTACA GTCAGACCTG GGATACCGGC 
CTGCGTTATA AAGAAGGTAT CTACGCGACA CAACTGATTG GCAGTTATAG CCATAGCAAG 
GATTATGATT ACGATCCTCG ACTGGGTATG CATGACAGTT CGGCAAGTTT GGTGGATTCA 
GAGCAATACA ACCTGCAGTG GGGAAATACC CTGCAGTTGG GCCAGGGGAC GGTCAGCTCA 
GGGGTTGATT GGCAACACCA GGAGATCAAG CCGAACTCCA CTACGGTCAA CGGTGAGAAA 
AGTCAGCGTA ACGCCGGTAT CTATCTGACC GCTCAGCAGT TGGTTGGCCC GGTAACCCTG 
GAAGGGGCGG TGCGTGGTGA CGATCATTCT GAATTCGGCT GGCATGGTAC CTGGCAAACC 
AGCGCGGGCT GGGAGTTTGT CGAAGGGTAC CGCTTTATTG CTTCCTATGG TACGGCGTTT 
AAAGCCCCAA ATATGGGCCA GCTGTATGGC AACTTTGGTA ATAATACCGA TTTGAAGCCG 
GAAGAAAGTA AACAGTGGGA AGGCGGTTTT GAAGGTTTGA CAGGTCCAGT GACCTGGCGC 
GTTTCCGGCT ACCGTAACGA TATTGATAAC CTGATTGATT CCACTGGGGA GACCAATTAC 
GTTTATTACA ATATCGGCAA GGCTACTATT AAAGGTATAG AAGCCACGGC TTCGTTTGAT 
ACCGGGCCGT TAACCCACCA TATCGGCTAC GACTATGTCG ACCCACGCAA TGCCAAAACC 
AACGAAGTGC TGCTGCGTCG CGCCAAACAG CAGGTGAAGT ATGAGCTGGA CTGGCAGGTC 
TATGATTTTG ACTGGGCGGT CACCTATCAA TACCTGGGGG AGCGCTATGA CAAAGACTAC 
AGCACCTACC CCGAGCAAAG CGTCAAACTC GGCGGTGTCA GCCTGTGGGA TCTCGCAGTT 
TCGTATCCGG TCACATCTCA TCTGACAGTT CGTGGTAGAA TCGCCAACCT GTTTGATAAA 
GATTATGAGA CGGCTTATGG CTACGCTACT CCAGGAAGAG AATACTACCT CACTGGAAGC 
TATACCTTCT AA 

 

Protein sequence

MTITKNTLLA VVSSITAFSG WAQDNTTANN SDDLVVSANR FPQPVSSVLA PTSVVTRDEI 
DRWQAKSLTD VMRRLPGVDV GQNGGLGQKS SLFIRGTNSS HVLVLIDGIR LNQAGISGSS 
DLSQIPISLV QKVEYIRGPR SAVYGSDAIG GVVNIITTRE KNGTTLSAGM GSNGYQAYDA 
STQQQLGDST VATLAGNYTY TKGYDVVAYG STGMQSQQDR DGYMSKALYG AVDHQFNEAI 
SGFVRGYGYD NRTAYDAYYS SPTSPLVDTR KLYSQTWDTG LRYKEGIYAT QLIGSYSHSK 
DYDYDPRLGM HDSSASLVDS EQYNLQWGNT LQLGQGTVSS GVDWQHQEIK PNSTTVNGEK 
SQRNAGIYLT AQQLVGPVTL EGAVRGDDHS EFGWHGTWQT SAGWEFVEGY RFIASYGTAF 
KAPNMGQLYG NFGNNTDLKP EESKQWEGGF EGLTGPVTWR VSGYRNDIDN LIDSTGETNY 
VYYNIGKATI KGIEATASFD TGPLTHHIGY DYVDPRNAKT NEVLLRRAKQ QVKYELDWQV 
YDFDWAVTYQ YLGERYDKDY STYPEQSVKL GGVSLWDLAV SYPVTSHLTV RGRIANLFDK 
DYETAYGYAT PGREYYLTGS YTF