Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4767 |
Symbol | |
ID | 5604576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 5273739 |
End bp | 5275250 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640940333 |
Product | ABC transporter-related protein |
Protein accession | YP_001480988 |
Protein GI | 157372999 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.883977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACACAT CTCAGACCAC GTTATTGGCG ATTAAGGGAT TATCCGTTGA GTTTCCTGGC GTTAAAGCGC TGGAGCAGGT CGATATCACG TTACAGCGCG GAGAGATCAT GGCGTTGCTG GGTGAAAATG GCGCGGGCAA ATCCACGTTA ATCAAAGCGT TAACCGGGGT CTATCAGCGT TCCGCTGGTG AGATACTGCT GGAGGGGCGC GCAATCGCCC CACAGAGCAC CGCACAGGCG CAAGTGCTGG GGATTGGTAC GGTTTATCAG GAGGTTAACC TGCTGCCGAA TATCTCGGTG GCGGCCAATC TGTTCATTGG TCGAGAGCCA ACGCGCTTCG GCCTGGTTGA TCAAAAAAAG TTGCTGCGCC AGGCTCAACA GCTTTTATTG GGGTATGGAT TACAGTTGGA TGTCAGCCAG CCATTAGGAA ATTACTCCAT TGCGATCCAG CAGATTATCG CTATCGCGCG GGCGGTCGAC CTGTCAGCGA AAGTCCTGAT CCTGGATGAA CCAACTGCCA GTCTGGATGC TAAAGAAGTC AGCATGCTAC TGGGTATTCT CAGCCAGCTC CGCACCCAGG GTATGGGGAT GATCTTTGTC ACCCACTTCC TCGATCAGGT TTACCGCATT TGCGATCGCA TCACTGTACT GCGCAACGGT AAGTTAGTGG GAACCAAGAT TACTGCTGAT TTACCGCGTC TGGAATTGGT ACAGATGATG CTTGGCCATG CCTTTGACGA ATCGCTGCTC AAACGCGGTG AGCACGGGCT AACTGAGGCG CCATCTCTGG TCGAATTCAG TGGTTACGGG CGACGCGGCA TGGTTGAACC CTTCGATCTG CAAATACGTC CGGGCGAGAT AGTTGGCCTG GCCGGCCTAC TGGGATCGGG GCGCACGGAA ACGGCTCAGC TGATATTCGG CATCAAACCT CGTGATAGCG GTAGTGCCAA AGTCGGGGGA CGTACGGTGA ACATCCGTAC GCCTCGTAAA GCGGCCAGTC TCGGTTTCGG CTATTGCCCT GAGGATCGTA AAACCGACGG GATTGTCGGC GCTGCAACGG TTCGGGAAAA CATCATTCTG GCTCTGCAGG CGCAACGCGG TTGGTTAAAA CCCTTATCGC TGCGGGAACA AACCCGCATT GCCGAGAGTT ATATCCAACT GCTGGGCATC CGCACTCCGG GGCCGGAACA GCAGATCCAA TATCTCTCCG GTGGCAATCA GCAGAAAGTG TTGCTGTCCC GCTGGTTGGC GACCAAACCG CGTTTTTTGA TCCTGGATGA ACCGACCCGC GGAATAGACG TTGGCGCACA TGCTGAAATC ATTCGTTTAA TTGAAAAACT CTGTGATGAA GGGCTGGCGC TGCTGGTGAT TTCTTCCGAA CTGGAAGAGC TGGCGGGCTA TGCCGATCGT ATCTTGGTGC TACGCGACAG AAAGCACGTG GCGCAGCTTG AACATGACGC CATTACGGTG CCTGCAATCA TGCAGGCGAT TGCCGCGCAA CAGGGGGGTT GA
|
Protein sequence | MDTSQTTLLA IKGLSVEFPG VKALEQVDIT LQRGEIMALL GENGAGKSTL IKALTGVYQR SAGEILLEGR AIAPQSTAQA QVLGIGTVYQ EVNLLPNISV AANLFIGREP TRFGLVDQKK LLRQAQQLLL GYGLQLDVSQ PLGNYSIAIQ QIIAIARAVD LSAKVLILDE PTASLDAKEV SMLLGILSQL RTQGMGMIFV THFLDQVYRI CDRITVLRNG KLVGTKITAD LPRLELVQMM LGHAFDESLL KRGEHGLTEA PSLVEFSGYG RRGMVEPFDL QIRPGEIVGL AGLLGSGRTE TAQLIFGIKP RDSGSAKVGG RTVNIRTPRK AASLGFGYCP EDRKTDGIVG AATVRENIIL ALQAQRGWLK PLSLREQTRI AESYIQLLGI RTPGPEQQIQ YLSGGNQQKV LLSRWLATKP RFLILDEPTR GIDVGAHAEI IRLIEKLCDE GLALLVISSE LEELAGYADR ILVLRDRKHV AQLEHDAITV PAIMQAIAAQ QGG
|
| |