| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4721 |
|---|
| Symbol | |
|---|
| ID | 5606820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 5216299 |
|---|
| End bp | 5216961 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640940287 |
|---|
| Product | fimbrial protein |
|---|
| Protein accession | YP_001480942 |
|---|
| Protein GI | 157372953 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.687124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGAA TAAGCAAAAA ATGGAGTCAA CACCTGCCGG GTTACCGCGA CTGGCAGTAC
TACGGCACCC TGGGTGCATT GGCGCTGATG GCCCCGATCA CACTTGGCAC GCTGCTGCTG
TTGCTGCCGA ATGCTCACGG GCAGGCGGTG GATAATTGGT ATACCGACGG CGCTAACGGC
GTGCTGCAGG TACGCGGTGC ATTGACCGAG AGCGCCTGTC GGCTGGAGAT GAGCAGTGCG
CGCCAGGATA TTCAACTGGG CGAGACCGGC ACCGGCCGGC TGCAAAACGT TGGTGACCGG
GGCACGCCGG TGGGTTTTGA ACTGCGTTTG CAGGATTGTC TGCGCAGCCC GGCGGGCAGC
CGCGACAGCC GCACCGGTGC GCTGACCTGG GCGGCGCAGC AGCCGGCGGT GACGGTAAGC
TTCAGCGCCC CGGCGGACGT TAACAATCCG CAACTGGTGA AGGTGCAGGG CGTCTCCGGG
CTGGCATTGC GAATGACCGA TCCGTTGGGG CAGGATGTGC GGCTGGGTAG CCGCGGACAA
CCGCTGCTGC TGACGCCGGG GCAGAACACG CTGGCGTACC ATGTGGCGCC GGAACGCACC
CGCACGCCGC TGGTGGCGGG CGCTTATTCG GCTTCGGTAG ATTTTCGGTT GAGTTATGAC
TGA
|
|---|
| Protein sequence | MQRISKKWSQ HLPGYRDWQY YGTLGALALM APITLGTLLL LLPNAHGQAV DNWYTDGANG
VLQVRGALTE SACRLEMSSA RQDIQLGETG TGRLQNVGDR GTPVGFELRL QDCLRSPAGS
RDSRTGALTW AAQQPAVTVS FSAPADVNNP QLVKVQGVSG LALRMTDPLG QDVRLGSRGQ
PLLLTPGQNT LAYHVAPERT RTPLVAGAYS ASVDFRLSYD
|
|---|
| |