Gene Spro_4719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4719 
Symbol 
ID5603427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5214850 
End bp5215356 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content47% 
IMG OID640940285 
ProductMrfE protein 
Protein accessionYP_001480940 
Protein GI157372951 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.151155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGA TGAAATATTC TATTCTTGAT TTTTGTATTA TTTTCGCGGC CGTTTGCTTT 
TTCGCCGTGT TCAGTATGGG TAGCCGTGCT GCTACGCCCA TCAATATTTC TGGCACTATT
ATGGCGCCAC CGCCCTGCGT AATTAACGGC GAAAAAACCA TTATGGTGGA TTTTGGTGAA
AATGTGGTGA TTTCACGCAT TGATGGCAGT AATTACCTGA CAACCATCAA GTACACGCTC
GAGTGCAAAG AGCAGACAAA AAATGCCATG AAGCTGATGA TTGCCGGTAC CGCAGCGGGA
TTTAACAGTG ATCTTATACA GACTTTTCGA ACAGATCTGG GAATTGCGCT GAAACAAAAT
GGCCAGCCGC TCCGGGTCAA CCAGTGGATG AATTTTAATT ACCCGGCACA ACCCGTATTG
CAGGCGGTAC CGGTGAAAAA ACCTGGCGCG GATCTGCCGA CGGGCGGATT TTTCGCCGGA
GCGACCTTAA AGGTGGACTA TCAGTGA
 
Protein sequence
MDKMKYSILD FCIIFAAVCF FAVFSMGSRA ATPINISGTI MAPPPCVING EKTIMVDFGE 
NVVISRIDGS NYLTTIKYTL ECKEQTKNAM KLMIAGTAAG FNSDLIQTFR TDLGIALKQN
GQPLRVNQWM NFNYPAQPVL QAVPVKKPGA DLPTGGFFAG ATLKVDYQ