Gene Spro_4708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4708 
Symbol 
ID5605432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5202687 
End bp5203763 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content55% 
IMG OID640940274 
Productmandelate racemase/muconate lactonizing protein 
Protein accessionYP_001480929 
Protein GI157372940 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAA TAAAACAGGT CAATCTCTAT CGAGCCGTAT CACCTTTATC TCGCCCTATC 
GCGGATTCCA CTCATTACAT CAATGAAATT TCCTTTGTGG TTGCCGAAGT GGTGCTGGCC
AGTGGCATCA CTGGCGAAGG GTATTTGCTT TCTTTCCACT ATTCGCCCGA GGCCATTGCC
GGAGCAATGA AAGATCTCCA ACAGTTTGCC GTGGGTTATC ACTGTTGGCA GACCGGTAAA
TTCCTGCGGG ACGTGGCGGC AGAGCACGAA TACTTTGGCC ACAACGGTTT GCAGAAGTGG
GCGGCGGCAA CGCTCAATGT CGCGATGTGG GACGCATGGG GTAAGACCCT GCAACAGCCG
ATCTGGAAGA TGTTGGGCAA CACCGTCGAT CGCGTGCCGG TGTATGGCAG TGGCGGTTGG
TTGTCATACA GCGAGGCCGA ACTGCTGGAA GAAGTGCTGG AATACCAGGC GCGTGGCTTG
CAGGCCGTGA AGATAAAAGT GGGTTCTCCG GAGGTAGAGC AAGACATCAT GCGTTTGCGC
AAAGTGCGGG AAGTGGTTGG CCCCGGGATG AAAATCATGA TGGATGCCAA TCAGGGGATG
ACCCTGCCGG ATGCGCTGAA GTTATCGACG CAGGCGGCAG AAATTGGCAT CCACTGGTTC
GAAGAACCCT TGGTGCATAC CGATTTTGAC GGCTATCAGC AGTTGCGCCA GAAAACCGGC
ATCGCACTGG CAATGGGCGA GCGGGAATAT GACATGGAAC CGCTCAAGGC CTTGATCGCC
CGTAATGCGC TGGATTTATG GCAACCGGAT CTGATCCGCA TCGGCGGCGT TGAACCCTGG
CGTGAGTCGG CGATGCTGGC ACATGCCCAT CACCTGCCGG TATTACCGCA TTACTACAAG
GATTATGACG TGCCGCTGCT GTGCACTATC CCCAACCCTT ACGGAGCGGA GTCTTTCGAC
TGGATCGACA GCATTATCGA TAACCCGATG ACCATTGACG GCGGCTACGC TTTTCCGCGC
TCTGGTGCAG GCTGGGGCTT TAATTTCAAC CCGGCATCTC TGACAGAAAT CAAATAG
 
Protein sequence
MDKIKQVNLY RAVSPLSRPI ADSTHYINEI SFVVAEVVLA SGITGEGYLL SFHYSPEAIA 
GAMKDLQQFA VGYHCWQTGK FLRDVAAEHE YFGHNGLQKW AAATLNVAMW DAWGKTLQQP
IWKMLGNTVD RVPVYGSGGW LSYSEAELLE EVLEYQARGL QAVKIKVGSP EVEQDIMRLR
KVREVVGPGM KIMMDANQGM TLPDALKLST QAAEIGIHWF EEPLVHTDFD GYQQLRQKTG
IALAMGEREY DMEPLKALIA RNALDLWQPD LIRIGGVEPW RESAMLAHAH HLPVLPHYYK
DYDVPLLCTI PNPYGAESFD WIDSIIDNPM TIDGGYAFPR SGAGWGFNFN PASLTEIK