Gene Spro_4671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4671 
Symbol 
ID5603604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5161918 
End bp5162448 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content53% 
IMG OID640940237 
Productfimbrial protein 
Protein accessionYP_001480892 
Protein GI157372903 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA ATAAATTAAT GCTGGCAACT GTGATTGCTT TCGCTTCTGC ATCTGTTGCT 
CACGCCGCAT CTAACCAGGG TAGCGGTAAA GTCACTTTTA CCGGTGAAAT TATTGATGCG
CCATGCAGCG TAGCACCGGA ATCTGTTGAC CAAACTGTGC CAATGGGCCA AATCAGCAGC
CGTCTGTTGG CCAAAGAAGG TAAATCCAGC TCTGAGCCAT TCAGCATTGA ACTGAAAGAC
TGTTCCATCG CCACGATGAA GAACGTCCAG GTGACCTTCA CCGGGACTCC GGATCCAGAT
AACAGCAAAC TGCTGGCTCT GAGCGGCACC GCAACCGGCG CTGGCATCAT GATCTATGAC
AACCTGCACT CCAAAGACGT TGAGCTGGGC ACCGCGACCG ATGGTCAGGG CCTGACCGAA
GGCAATAACT CCCTGAAATT CGCCGCCTAT CTGCAAGGCA GCAGCGCTTC TGGCGCCGTG
GTTCCAGGCG AATTCACCAG CGTTGCAAAC TTCACTCTGG CCTACCTGTA A
 
Protein sequence
MKLNKLMLAT VIAFASASVA HAASNQGSGK VTFTGEIIDA PCSVAPESVD QTVPMGQISS 
RLLAKEGKSS SEPFSIELKD CSIATMKNVQ VTFTGTPDPD NSKLLALSGT ATGAGIMIYD
NLHSKDVELG TATDGQGLTE GNNSLKFAAY LQGSSASGAV VPGEFTSVAN FTLAYL