Gene Spro_4661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4661 
Symbol 
ID5603143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5151202 
End bp5152038 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content55% 
IMG OID640940227 
ProductRpiR family transcriptional regulator 
Protein accessionYP_001480882 
Protein GI157372893 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACC CAACTCAACT TTCGCTGTTA CAGGACGAGA TCCGCCACCG TTATGAAACG 
CTGAGCAAGC GTTTAAAACA GGTGGCGCGT TACATTTTAG ATAACAGTAA CAGCATTGCT
TTCGATACCG TCGCCTCCAT CGCCGCACAG GCCAGCGTCC CCCCTTCAAC CCTGATCCGC
TTTGCCAACG CCTTTGGCTT TAGCGGTTTC AACGAAATGA AACAGGTTTT CCGCCAGCAC
CTGATGGAGG AAACGGTCAA CTACACCGAA CGGGCACGCC TGTTCCGGCA GACCTCTACC
GACGGTAACG TGGCCCCGGA AAAGCCGGCG GAAATCCTTA ACGTTTTCAC CATGGTCAAT
GCCCAGGCGC TGCAACAATT GGCGATGCAA ACCAGTTCCG AGCAGTTGGA TCGGGCGGTT
GAACTGCTGA ACAATGCCGA GAATATCTAC GTGATTGGCC TGCGTCGCTC ATTTAGCGTC
GCATCCTATC TCACCTATGC GTTGCGCCAT CTGGAGCGCC GGGCGTTCCT GATCGACGGG
CTGGGCGGCA TGTTTACCGA ACAACTCAGC ATGGTGAAGC CGAATGACGT GGTGATTGCC
ATCAGCTATT CGCCGTATGC GCAGGAAGCG CTGGAACTGG TTGAATTAGG TGCCAAGAAC
GGAGCGCAGC AGATCGCCAT AACCGACAGC CAGGTCAGCC CGTTGGCTGC CTTCAGCGAC
GTGTGCTTTG TGGTACGAGA GGCGCAGGTG GATGGCTTCC GCTCCCAGGT TGCTTCAATG
TGTCTGGCAC AGACCCTGGC AGTATCGCTG GCGCTGAATA ACGCCAAAGA AGAGTAA
 
Protein sequence
MNNPTQLSLL QDEIRHRYET LSKRLKQVAR YILDNSNSIA FDTVASIAAQ ASVPPSTLIR 
FANAFGFSGF NEMKQVFRQH LMEETVNYTE RARLFRQTST DGNVAPEKPA EILNVFTMVN
AQALQQLAMQ TSSEQLDRAV ELLNNAENIY VIGLRRSFSV ASYLTYALRH LERRAFLIDG
LGGMFTEQLS MVKPNDVVIA ISYSPYAQEA LELVELGAKN GAQQIAITDS QVSPLAAFSD
VCFVVREAQV DGFRSQVASM CLAQTLAVSL ALNNAKEE