Gene Spro_4653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4653 
Symbol 
ID5602619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5140806 
End bp5141501 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content56% 
IMG OID640940219 
Productpirin domain-containing protein 
Protein accessionYP_001480874 
Protein GI157372885 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.620728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTATT TACGTAAGGC AGAAGATCGC GGTCATGCCA ATCATGGTTG GCTGGACAGC 
TGGCACACCT TCTCATTTGC CAACTATCAC GATCCTGATT TTATGGGTTT TTCGGCGCTG
CGGGTGATTA ACGAAGACGT GATTGACGCA GGGCAGGGTT TTGGCACCCA CCCGCATAAA
GACATGGAAA TCCTGACCTA CGTGCTGAGC GGCACGGTAG AACACCAGGA CAGCATGGGC
AATAAAGAGC AGATCCAGGC CGGTGAATTC CAGATCATGA GTGCCGGCAC CGGAGTACGT
CACTCCGAGT ACAACGGCAA TAGCGATCGT CCGTTGCACC TGTACCAGAT TTGGATCATT
CCCGATCGGG TCGGGCTGGA ACCGCGTTAT GAGCAACGCA TGTTTGATGC GCCGCAGGGC
CGTCAACTGG TGCTGTCGCC GGACGCACGT GAAGGTTCAC TGAAGGTGTT CCAGGACATG
ACGCTGTCCC GTTGGGCGTT AGGTAAAGAC GAACTGGCGG AGTGCCCGAT TGAAGCCGGA
CGTCGCGTGT GGATCCAGGT GGTACGCGGC AAGGTGACGG TCAACGGTCA ACAGGCCGGC
ACCAGCGATG CTTTCGCGGT GTGGGATGAA ACTGCACTGT CGATTAAGGC CGATGAAGAC
AGCGAAATCT TGCTGTTCGA TCTGCCGCCA GTCTGA
 
Protein sequence
MIYLRKAEDR GHANHGWLDS WHTFSFANYH DPDFMGFSAL RVINEDVIDA GQGFGTHPHK 
DMEILTYVLS GTVEHQDSMG NKEQIQAGEF QIMSAGTGVR HSEYNGNSDR PLHLYQIWII
PDRVGLEPRY EQRMFDAPQG RQLVLSPDAR EGSLKVFQDM TLSRWALGKD ELAECPIEAG
RRVWIQVVRG KVTVNGQQAG TSDAFAVWDE TALSIKADED SEILLFDLPP V