Gene Spro_4652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4652 
Symbol 
ID5602618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5139679 
End bp5140710 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content57% 
IMG OID640940218 
ProductLacI family transcription regulator 
Protein accessionYP_001480873 
Protein GI157372884 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.478263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC ATTCACGGTT AGCCAGTTCA TTGATAATGA AGAAAAAACG GCCGGTACTC 
CAAGATGTTG CAGACAAGGT TGGCGTAACC AAGATGACGG TGAGCCGTTA TCTGCGTAAT
CCCGATCAGG TTTCTGCCGT CTTGCAGCAA AAAATTGCCG TCGCGCTTGA TGAGCTGGGC
TACATTCCCA ACCGTGCGCC GGATATCCTT TCCAACTCCA CCAGCCGCGC CATTGGCGTC
CTGCTGCCGT CGCTGACCAA CCAGGTGTTT GCCGAAGTAT TGCGCGGCAT CGAGAGCGTC
ACCGATGCGC ACAATTACCA GACCATGCTG GCGCACTACG GCTATTTGCC GGAGCGTGAA
GAACAGCGCC TGACCTCGTT GCTGTCTTAC AATATTGATG GGTTGATCCT GTCTGAACGT
CACCATACGC CACGTACCAT GAAAATGATC GAGGTTGCGG GTATCCCGGT CGTCGAGCTG
ATGGACTGCG TTTCGCCCTG TATCGATCTG GCGGTAGGTT TCAATAACTT TGAGGCCGCA
CGCCAGATGA CCCAGCAAAT CATCGCGCAC GGCCATCGCC ACGTGGTGTA TTTCGGCGCG
CGTCAGGATG AACGTACCAT TATCAAACAG CAGGGCTATG AACAGGCGAT GCGTGAATCC
GGTCTGCAGC CTTACAGCGT GATGACGGCG CGTTCGTCTT CTTATTCCGC CGGTGGTGAA
CTGCTGCGTC AGGCGCAACG CGACTACCCG CAGATTGACA GTATTTTCTG CACCAACGAT
GACCTGGCAA TAGGGGCTAC CTTCGAGTGC CAGCGGCAGG GGCTGTCGAT CCCCAACGAT
ATGGCGATTG CCGGTTTCCA CGGCCACGAT ATCGGTCAGG TGATGGTGCC GAAGCTGGCC
AGCGTGTTGA CGCCGCGTGA ACGCATGGGG CAAATCGGCG CCGAACGCCT GTTGGCCCGA
CTGCGGGGTG AAACGGTCAG CCCGCGCATG GTGGACGTTG GTTTCACCGT GATCCCCGGT
GGCAGTATCT GA
 
Protein sequence
MSAHSRLASS LIMKKKRPVL QDVADKVGVT KMTVSRYLRN PDQVSAVLQQ KIAVALDELG 
YIPNRAPDIL SNSTSRAIGV LLPSLTNQVF AEVLRGIESV TDAHNYQTML AHYGYLPERE
EQRLTSLLSY NIDGLILSER HHTPRTMKMI EVAGIPVVEL MDCVSPCIDL AVGFNNFEAA
RQMTQQIIAH GHRHVVYFGA RQDERTIIKQ QGYEQAMRES GLQPYSVMTA RSSSYSAGGE
LLRQAQRDYP QIDSIFCTND DLAIGATFEC QRQGLSIPND MAIAGFHGHD IGQVMVPKLA
SVLTPRERMG QIGAERLLAR LRGETVSPRM VDVGFTVIPG GSI