| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4627 |
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| Symbol | |
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| ID | 5604451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 5103204 |
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| End bp | 5105537 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640940193 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001480848 |
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| Protein GI | 157372859 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACC CACTGAGCCG CATTATTGCA ACAGAACTGC AGGCCCGGCC GGAGCAAGTT
GACTCCGCCA TCCGTCTGCT GGATGAAGGT AATACCGTGC CCTTTATTGC ACGCTATCGT
AAGGAAGTCA CCGGGGGTCT GGACGATACC CAACTGCGCC AGCTGGAAAC CCGCCTGGGT
TATCTGCGTG AACTGGAAGA CCGCCGTCAG ACCATCCTTA AATCAATCGA CGAGCAGGGC
AAACTGACCG AACAGCTGGC GGGGGCGATC ACCGCCACGC AAAGCAAAAC CGAACTTGAA
GATCTCTACC TGCCGTACAA ACCCAAGCGC CGCACCCGTG GGCAGATCGC GATTGAAGCC
GGTCTGGAGC CCCTGGCAGA CACCCTGTGG CAGGATCCTC AGCAGCAGCC TGAACAACTG
GCCGAAGGCT ACGTTGATGC CGACAAGGGC GTAGCGGACG TTAAAGCCGC CCTCGACGGC
GCGCGTTACA TTCTGATGGA GCGCTTTGCC GAAGACGCCG CGCTGCTGGC CAAGGTTCGT
AATTACCTGT GGAAGCACGC GCATCTGGTC TCCAAAGTGG TGGAAGGCAA AGAAGAAGCC
GGCGCGAAAT TCCGCGACTA CTTCGATCAC CACGAACCTA TTGCCCAGGT GCCTTCACAC
CGTGCGCTGG CCATGTTCCG TGGCCGCAAC GAAGGCGTGC TGCAACTGGC GCTGAACGCC
GACCCACAGT TTGAAGAAGC CCCGCGCGAA AGCCAGGCGG AACAGATCAT CATCAGCCAT
CTCGATTTGC GCCTGAATAA CGCCCCGGCA GATGCCTGGC GCAAAGCGGT GGTCAACTGG
ACCTGGCGCA TCAAGGTGTT GCTGCATCTG GAAACCGAAC TGATGAGCAC CCTGCGCGAA
CGTGCGGAAG ATGAAGCAAT CAACGTCTTC GCCCGTAACA TGCACGATTT GCTGATGGCC
GCACCGGCCG GCATGCGTGC GACCATGGGG CTGGATCCGG GCTTGCGTAC CGGGGTGAAA
GTGGCGGTGG TGGATGCCAC CGGCAAGCTG GTCGCCACCG ACACCGTCTA CCCGCACACC
GGCCAGGCCG CCAAAGCCGC GGCCATCGTC GCGGCACTGT GCATCAAACA CAAAGTGGAA
CTGGTCGCCA TCGGCAACGG TACCGCATCG CGTGAGACCG AGCGTTTTTA TCTTGATTTG
CAACAGCAAT TCGGCGAAGT CAAAGCGCAG AAAGTGATCG TCAGCGAAGC CGGTGCCTCG
GTGTATTCCG CCTCCGAACT GGCGGCGCTG GAGTTCCCGA ATCTCGACGT CTCGCTGCGT
GGCGCCGTCT CCATCGCCCG TCGCCTGCAG GATCCACTGG CCGAACTGGT CAAAATCGAT
CCGAAATCCA TCGGTGTTGG TCAGTACCAG CACGATGTCA GCCAAAGCCA ACTGGCGAAA
AAACTCGATT CGGTGGTTGA AGACTGCGTA AACGCCGTCG GGGTTGATCT GAACACCGCT
TCGGTGCCGC TGCTGACCCG CGTGGCCGGC CTGACCCGCA TGATGGCGCA GAACATCGTT
ACCTGGCGTG ATGAGAATGG CCGTTTCAGC AACCGCGAAC AGCTGTTGAA AGTCAGCCGC
CTGGGGCCAA AAGCCTTTGA GCAGTGCGCT GGCTTCCTGC GTATCAACCA CGGCGACAAC
CCGCTGGACG CCTCGACCGT TCACCCGGAA ACCTACCCGG TGGTCGAACG CATTCTGGCC
GCCACCCGCC AGGCACTGCA AGATCTGATG GGTAACCCGG CAGCGGTACG CAGCCTGAAG
GCCAGCGATT TCACCGACGA CAAGTTCGGC GTGCCAACGG TGACCGACAT CCTGAAAGAG
CTGGAGAAAC CGGGCCGCGA TCCGCGTCCG GAATTCAAAA CCGCCACCTT CGCCGAGGGC
GTTGAAACCC TGAGCGACCT GCAGCCGGGG ATGATTTTGG AAGGTTCAGT GACCAACGTC
ACCAACTTCG GAGCCTTTGT CGATATCGGC GTGCATCAGG ACGGTCTGGT GCATATCTCC
TCGTTGGCGG ACAAGTTTGT CGAAGATCCG CACACCGTGG TGAAAGCCGG TGACATCGTC
AAAGTGAAGG TGATGGAAGT GGATCTGCAG CGCAAACGCA TCGCGCTGAG CATGCGTCTG
GACGAGCAAC CGGGTGAAGG TTCACCACGC CGCGGCGGTA ACGCCGCCCC GGCCAGGGAC
AACGCCAACC GGGCACCGGT CAATAAGGGC AAACCGCGCG GCAACAACAA CACCTCGGCG
GGTAACAGCG CCATGGGTGA CGCGCTGGCG GCGGCATTCG GCAAAAAATC TTAA
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| Protein sequence | MNDPLSRIIA TELQARPEQV DSAIRLLDEG NTVPFIARYR KEVTGGLDDT QLRQLETRLG
YLRELEDRRQ TILKSIDEQG KLTEQLAGAI TATQSKTELE DLYLPYKPKR RTRGQIAIEA
GLEPLADTLW QDPQQQPEQL AEGYVDADKG VADVKAALDG ARYILMERFA EDAALLAKVR
NYLWKHAHLV SKVVEGKEEA GAKFRDYFDH HEPIAQVPSH RALAMFRGRN EGVLQLALNA
DPQFEEAPRE SQAEQIIISH LDLRLNNAPA DAWRKAVVNW TWRIKVLLHL ETELMSTLRE
RAEDEAINVF ARNMHDLLMA APAGMRATMG LDPGLRTGVK VAVVDATGKL VATDTVYPHT
GQAAKAAAIV AALCIKHKVE LVAIGNGTAS RETERFYLDL QQQFGEVKAQ KVIVSEAGAS
VYSASELAAL EFPNLDVSLR GAVSIARRLQ DPLAELVKID PKSIGVGQYQ HDVSQSQLAK
KLDSVVEDCV NAVGVDLNTA SVPLLTRVAG LTRMMAQNIV TWRDENGRFS NREQLLKVSR
LGPKAFEQCA GFLRINHGDN PLDASTVHPE TYPVVERILA ATRQALQDLM GNPAAVRSLK
ASDFTDDKFG VPTVTDILKE LEKPGRDPRP EFKTATFAEG VETLSDLQPG MILEGSVTNV
TNFGAFVDIG VHQDGLVHIS SLADKFVEDP HTVVKAGDIV KVKVMEVDLQ RKRIALSMRL
DEQPGEGSPR RGGNAAPARD NANRAPVNKG KPRGNNNTSA GNSAMGDALA AAFGKKS
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