| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4619 |
|---|
| Symbol | |
|---|
| ID | 5604511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 5094924 |
|---|
| End bp | 5095403 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640940185 |
|---|
| Product | PilT domain-containing protein |
|---|
| Protein accession | YP_001480840 |
|---|
| Protein GI | 157372851 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTC TCGATACCAA TGTAATTTCA GAGTTACTGC GCCCGGCACC TCATTACCAT
GTTTTAAGGT GGCTGGATCA ACAAGATACG TATCAATTCT ATCTGAGCGC TGTCGTGATA
GCGGAGCTAT ATACTGGCAT AGCCTGCATG CCCCATGGCA AAAAGCAGTT TGAGTTACAG
TCCAATCTCG GCGTAATGCT GCAGGAAGAG TTTCTGGACA GGGTTTTACC CTTTGACACT
GGCTGCGCTC TGCAGCATGC GGAGTTAATG GGTGCCAACC GCCGCCAAGG CATCGGCGTC
AGTTTCCCAG ACACCCAAAT CGCCGCCACC TGCCTGCATT ACGGTGCTGC CCTGGCCACG
CGTAATACCA AAGACTTTAT CCATTGCGGA ATTGAATTAA TCGACCCCTG GCAAGCCAGC
ACCGGTCGGC GTCTGCATGA AGAAGCGGCG GAATATTACG TCATGAGCAG AAAACCCTGA
|
|---|
| Protein sequence | MIILDTNVIS ELLRPAPHYH VLRWLDQQDT YQFYLSAVVI AELYTGIACM PHGKKQFELQ
SNLGVMLQEE FLDRVLPFDT GCALQHAELM GANRRQGIGV SFPDTQIAAT CLHYGAALAT
RNTKDFIHCG IELIDPWQAS TGRRLHEEAA EYYVMSRKP
|
|---|
| |