Gene Spro_4609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4609 
Symbol 
ID5605157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5083372 
End bp5083908 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content57% 
IMG OID640940175 
Productfimbrial assembly family protein 
Protein accessionYP_001480830 
Protein GI157372841 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00150076 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAGG TTAATCTTTT GCCCTGGCGC ATGCGGGGCC AGCGTCGCCG CTATGCCTTT 
TGGTTACGCG TATTCATCTT GCAGTTGGTG CTGGTGTTGG CGGCACTGAT GGTGGTTTTC
GGCCTGTTGA GTCAGCAACA GGTACAGCGG CATGAGGCAC TGCTGATGCT GAGCGGCCAA
CAGACAGAAT TGACCGAACG CTATCAACAA TTGCAACAGG CGGTGGCGCG TCTGGCACGC
TTAACCGCGT TGGCGCAACA GCATGACAAC AATCGGGTGC ATAACCGGCG TTACCTGCAG
CTGTTGCAGC AGCTCTCCAC CCTGTTGCCT GCCCCGGTGT GGCTTATCGC ACTGGAAAGC
CACTCGCAGA ATATCACTTT ACGGGGACTT GGCCGGCGTT ATGAGGCGGT GCTTCAGTTT
GAGCAGCAAC TGACGGCGTT ACCCCTGTTA CAGAACTACC GCCTGGCAGA GGTGGTACAG
CGTCAGGATG GTCTGTTCTC GTTTACCTTG ATGGCGCAAT GGGGGCCGGG TGGATAA
 
Protein sequence
MYQVNLLPWR MRGQRRRYAF WLRVFILQLV LVLAALMVVF GLLSQQQVQR HEALLMLSGQ 
QTELTERYQQ LQQAVARLAR LTALAQQHDN NRVHNRRYLQ LLQQLSTLLP APVWLIALES
HSQNITLRGL GRRYEAVLQF EQQLTALPLL QNYRLAEVVQ RQDGLFSFTL MAQWGPGG