Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4600 |
Symbol | |
ID | 5606124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 5075523 |
End bp | 5076221 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640940166 |
Product | phosphoglycolate phosphatase |
Protein accession | YP_001480821 |
Protein GI | 157372832 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.383007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT TTGGAGCCAT CCGCGCTCTG GCTTTCGATC TCGATGGCAC GCTGGTAGAC AGCGCGCCGG GGTTGGCTGC CGCTATCGAT CTGGCCTTGG CGGAAATGGG CCTGCCGCAG GCCGGTGAGG CCCGGGTTGG CACCTGGATT GGCAACGGCG CCGACGTGCT GGTACAGCGT GCGCTGCGCT GGGCAGAAGT GGAAGCCACG CCGGAGCACT GCGGGCAACT GCGCGAGCGC TTCGATCATT TCTATGCGCA AACCGTCGAC AGCGGCAGTC GCCTGTTCCC ACAGGTGAAA GAAACCCTGG CTCAACTGGC TGCGCAAAAT TACCCGATGG CGCTGGTGAC CAACAAGCCA ACGCCGTTTG TTGCGCCGTT GCTGGCCGCA TTGGGCATTA TTGATTACTT CTCGCTGATT ATCGGCGGTG ACGACGTGGT GGAAAAGAAA CCGCACCCGG CGCCGCTGTA TCTGGTCCTC GGCAAGCTTG GCCTGCGCGC CAACGAGTTG CTGTTTGTCG GCGACTCCCG CAATGATATT CAGGCGGCAC AGGGGGCAGG TTGCCCAAGC GCCGCGCTGA CTTACGGTTA TAACTACGGC GAGGCCATTG CCCTGAGCCA TCCCGACCGC GTGTTGGAGC GCTTTGCCGA TTTGTTGCCC GCTCTTGGGC TGTCATCTTT AGAGAATCAG GAAATTTAA
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Protein sequence | MADFGAIRAL AFDLDGTLVD SAPGLAAAID LALAEMGLPQ AGEARVGTWI GNGADVLVQR ALRWAEVEAT PEHCGQLRER FDHFYAQTVD SGSRLFPQVK ETLAQLAAQN YPMALVTNKP TPFVAPLLAA LGIIDYFSLI IGGDDVVEKK PHPAPLYLVL GKLGLRANEL LFVGDSRNDI QAAQGAGCPS AALTYGYNYG EAIALSHPDR VLERFADLLP ALGLSSLENQ EI
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