Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4588 |
Symbol | |
ID | 5607255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 5060798 |
End bp | 5062483 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640940154 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_001480809 |
Protein GI | 157372820 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAT TTAGCCAGGT TCTGCTGCTG TTGCAGCAGA TGTGCGTTTA TCTTGTCATT GCTTATTTAC TGAGCAAAAC CCCGTTATTC ATTCCGCTGA CGCAGGTGAC CATTCGCCTG CCGCACAAGC TATTGTGCTA CGTCATTTTC TCGGTGTTCT GCATCATGGG CACCTATTTC GGTCTGCATG TCGAAGGTTC CATTGCCAAC ACCCGCGCTA TCGGCGCCGT ATTGGGCGGC CTGTTGGGTG GGCCTTCGGT CGGGCTGCTG GTGGGGCTGA CCGGTGGCCT GCACCGTTAT ACCCTGGGGG GCATGACCGA TATCGCCTGT GCGGTATCAA CCGTGGCGGA AGGGCTGGTG GGCGGGCTGG TGCATAGCAT CGCCATGCGT CACCGGCGTA TCGACCTGCT GTTTAATCCG TTGTTTGTCG CCGGGGTCGC GCTGGTGACC GAAGTGCTGC AAATGGTGAT TATCCTCGCG ATTGCGCGGC CGTTCGACGA GGCGCTGCGG CTGGTGGAAC ATATCGCTTT GCCGATGTTG ATCGCCAATA CGGTGGGGGC CGCGATGTTC ATGCAAATCC TGCTGGACAG GCGAGCGATG TTCGAGAAAT ACACCGGTGC GTTTTCCGCC AAGGCGCTGA AGATTGCCGA ACGTACCGAA GGGATCTTGC GACAGGGGTT TGATCAGGAA AACAGCATGA GGGTGGCGCG GGTGATCTAT CAGGAGCTGG GTATCGGTGC CGTAGCAATA ACCGACCGCG ATAAACTGCT GGCGTTTATC GGCATCGGTG ACGACCATCA CCTGCCGGGC ACGCCGATTT CATCAAAGCA CTCGCACCGC GCAATCGACA ACAACGAAGT GGTCTACGCC GACGGCAATG AGCACTCCTA CAGCTGCTCG ATTAACCCCG GTTGCAAACT GGGTTCGACA CTGGTGATCC CGCTGCGCGG TGAGAATCAG CGGGTGATCG GCACCATTAA ACTGTATGAA CCGAAGAGCC GGTTGTTCAG CACCATCAAC CGTACGCTGG GGGAAGGTAT CGCCAGCCTG TTATCCGCAC AGATTATGGC TGGCCAGTAT GAGCGCCATA AACAGCTGCT GGCGCAGTCA GAAATCAAAT TACTGCATGC GCAGGTCAAT CCGCACTTTC TGTTTAACGC CCTGAATACG CTGGTGGCGG TGATCCGCCG TGACGGCGAC CGGGCCTGTG AGCTGGTGCA GTCACTTTCG ACCTTTTTCC GCAAGAACCT CAAGCGTTCC GGTGATGAGG TCAGCCTGGC GGACGAACTC GAGCATGTGA ATGCCTACCT GCAAATTGAA CTGGCACGTT TTGCCGATCG GCTGGAAGTC GTGGTTTCGT TGCCGCAAGA CCTGTTGGCA GTACGGTTGC CGGCATTTTC ACTGCAGCCG ATCGTGGAGA ATGCCATTAA GCATGGCACT TCGCAGCTGT TGGGGGTGGG GCGGATTGAT ATCGGTGCGC GGCGCGAAGG GGAATGCCTG TTGCTGCAGG TGACCGACAA TGCCGGATTA TTCCAATCGC AGCCGAACAA CAGTGGGCTG GGGATGAACC TGGTGGATAA GCGTATCCGC GTACGCTACG GCGATGATTA TGGTGTACAG GTAGCCTGCG AGCCGCAAAC ATTCACCCGG ATTACAATCA ATGTCCCCTT GGCGAGGGCT GCCTGA
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Protein sequence | MFEFSQVLLL LQQMCVYLVI AYLLSKTPLF IPLTQVTIRL PHKLLCYVIF SVFCIMGTYF GLHVEGSIAN TRAIGAVLGG LLGGPSVGLL VGLTGGLHRY TLGGMTDIAC AVSTVAEGLV GGLVHSIAMR HRRIDLLFNP LFVAGVALVT EVLQMVIILA IARPFDEALR LVEHIALPML IANTVGAAMF MQILLDRRAM FEKYTGAFSA KALKIAERTE GILRQGFDQE NSMRVARVIY QELGIGAVAI TDRDKLLAFI GIGDDHHLPG TPISSKHSHR AIDNNEVVYA DGNEHSYSCS INPGCKLGST LVIPLRGENQ RVIGTIKLYE PKSRLFSTIN RTLGEGIASL LSAQIMAGQY ERHKQLLAQS EIKLLHAQVN PHFLFNALNT LVAVIRRDGD RACELVQSLS TFFRKNLKRS GDEVSLADEL EHVNAYLQIE LARFADRLEV VVSLPQDLLA VRLPAFSLQP IVENAIKHGT SQLLGVGRID IGARREGECL LLQVTDNAGL FQSQPNNSGL GMNLVDKRIR VRYGDDYGVQ VACEPQTFTR ITINVPLARA A
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