| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4581 |
|---|
| Symbol | |
|---|
| ID | 5605280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 5053593 |
|---|
| End bp | 5055683 |
|---|
| Gene Length | 2091 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640940147 |
|---|
| Product | YccS/YhfK family integral membrane protein |
|---|
| Protein accession | YP_001480802 |
|---|
| Protein GI | 157372813 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR01667] integral membrane protein, YccS/YhfK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.271308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGAG TCATCATGTG GCGCCGACTG ATCTACCACC CGGAAGTTAA TTACGCACTG
CGGCAAACGC TGGTGCTTTG CCTGCCGGTA CTGCTTGGCC TGCTGATCGA CCAACTGCAA
TACGGCCTGT TATTTTCCCT GGTTCCCGCC TGCTGTAACA TCGCCGGGCT GGACACGCCT
CACAAACGTT TTTTCAAACG CCTGATCGTC GGCGGTTCAC TGTTCGCACT CAGCAGTTTG
TTACTGCAGC AAGCCCTGTT ATGGCAGTTG CCGCTGCCGA TACTGATGCT CGGCCTGGCG
CTGCTGCTCG GCGTCAGCGG TGAAATCAGC CCGTTACACG CCCGTCTGCT GCCCGCTGCG
CTGGTTGCCG CTATCTTCTC CCTCAGCATG GCCGGTTCAG TACCGCTTTG GCATGCGCCG
CTGTTATATG TGGTCGGCAC CGCCTGGTAC GGGCTGTTCA CCTGGTTCTG GTTCAAACTG
TGGAAAGAGC AGCCGATGCG CGAGTCGCTC AATCAGCTCT ATCTGGAGTT GGCGGACTAC
TTCGAGGCCA AATACTCACT GCTGACCCAG CATACCGATC CACAGACCGC GTTACCGCCG
TTGTTGGTTC GTCAGCAAAA GGTGATGGAC CTGATTACTC TGCTGTATCA GCAGCTAAAC
TTTCTGCCGC ACGCCAGTAA CCTCGAACAA AAACGTCTGC AACGAACCTT TCAGGTCGCG
CTGGATTTGC AGGAACACAT CACCGTCAGC CTGCACCTGC CGGAAGAGGT ACAAAAACTG
GTAGAACAGA GCCAGGCCGA AGCGATTATC CGCCGCAACG CACAGGTGAT TGCCGGCCGG
CTACGCACGG TGGCGCACGA TATTCTCTAT CACCAGCATT CGCAGCGCTT CAATATGGGC
AATGAACTGG CAGCATTGGA AAAAGTGGCG GCACAGCACC CGGATAATCC GGTGGGTCAG
TTCTGCTACT ACCACTTCAG TCGCATCGCC CGTCTGCTAC GTACCCAGCA TCCACTCTAC
CGGCGTGACC TGATGGCCAA TCAAAACCGC CTGCCGTTTT GGCCGGCGCT GGTCAGTTAT
CTGTCGTTCA AATCCAATGC CCTGCGTAAT GCGGCACGAT TAGGCGTCAC GCTGGCGGCA
GGCAGCAGCC TGGGGATGAT TTTCAACCTG CCGAAACCCT ACTGGATCCT GCTCACCATC
ATGCTGGTGA GCCAGAACGG CTACAACGCC ACCCGGGTGC GCATCCAGCA CCGTGCGCTC
GGTACTCTGG CCGGGCTGGT GATCGCCGCC GGTCTGCTGC AATTACAACT GCCCGAGGCC
GAAACCCTGA GCGTGATGCT GGTGATTACG CTGCTGGCCT ATATGGTGTC ACGTAAAAAT
TACGGATTGG CGGTGATTGG TTTTACGGTG ACGGCGGTCT ATACCCTGCA ATTACTGGCG
CTGAACGGCA CGAATTTCCT GGTGCCGCGT CTGATCGACA CCCTGATTGG CTGCGTGCTG
GTGTTCGGCA GTACCATTTG GCTGTGGCCT CAGTGGCAAA GCGGGCTGCT GCGCAAGAAT
GCCCATCAGG CGCTGGAGAA CGATCAGCAG GCGTTACGTT TGTTGCTGGA AGAGCAAGAG
CCGGATCCCA CGGCACTGGC CTACGCACGC ATGCAGGTCA ATCAGGCGCA CAACGCGTTA
TTCACCTCAC TGAATCAGGC GATGCAGGAA CCGGGGTTTG AATCGAACTA CCTGGCGGAT
ATGCGCCTGT GGGTGACGCA CAGCCAGTTT ATTGTCGAGC ATCTGAATGC GATGACTATT
CTGGCGCGCG AGCACTATAT GCTGACGCCA AAACTGGCGG AGGAGTATCT GCAATCTTGC
GAGATCGCGC TGCAGAGCTG TCAGCAACGG CTGGAGTACG ACGGGCCGAG CAGTGGCAAC
AGCATTATGC AGCCGCCGGA TTTGCACCCA GATATGCCGG TGACCGAAAT GGAGCGCCAC
CTGCGGCGTA TTCTTTCACA CCTGAGCGTG ATGCATACCA TCTCGTCATT GGCCTGGAGC
CAACGCCCAC ACCACGGCAT CTGGCTGAAA CGCAAACTGC GCGATCAATA A
|
|---|
| Protein sequence | MPRVIMWRRL IYHPEVNYAL RQTLVLCLPV LLGLLIDQLQ YGLLFSLVPA CCNIAGLDTP
HKRFFKRLIV GGSLFALSSL LLQQALLWQL PLPILMLGLA LLLGVSGEIS PLHARLLPAA
LVAAIFSLSM AGSVPLWHAP LLYVVGTAWY GLFTWFWFKL WKEQPMRESL NQLYLELADY
FEAKYSLLTQ HTDPQTALPP LLVRQQKVMD LITLLYQQLN FLPHASNLEQ KRLQRTFQVA
LDLQEHITVS LHLPEEVQKL VEQSQAEAII RRNAQVIAGR LRTVAHDILY HQHSQRFNMG
NELAALEKVA AQHPDNPVGQ FCYYHFSRIA RLLRTQHPLY RRDLMANQNR LPFWPALVSY
LSFKSNALRN AARLGVTLAA GSSLGMIFNL PKPYWILLTI MLVSQNGYNA TRVRIQHRAL
GTLAGLVIAA GLLQLQLPEA ETLSVMLVIT LLAYMVSRKN YGLAVIGFTV TAVYTLQLLA
LNGTNFLVPR LIDTLIGCVL VFGSTIWLWP QWQSGLLRKN AHQALENDQQ ALRLLLEEQE
PDPTALAYAR MQVNQAHNAL FTSLNQAMQE PGFESNYLAD MRLWVTHSQF IVEHLNAMTI
LAREHYMLTP KLAEEYLQSC EIALQSCQQR LEYDGPSSGN SIMQPPDLHP DMPVTEMERH
LRRILSHLSV MHTISSLAWS QRPHHGIWLK RKLRDQ
|
|---|
| |