Gene Spro_4573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4573 
Symbol 
ID5607277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5047368 
End bp5048348 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content60% 
IMG OID640940139 
ProductLacI family transcription regulator 
Protein accessionYP_001480794 
Protein GI157372805 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0936264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCG AAAAGGTGGC GAAACTCGCC GGCGTCTCTG CCGCGACGGT CTCACGGGTA 
TTGAACGGCC AGCAAATCGT CAAACCGGCC ACTCGCGACA AGGTACTGGC GGCGATCCGC
GCATGCGACT ACCAACCCAA CCTGCTGGCG CGTCAGCTAC GCACTTCGCG TAGCCGTATG
CTGCTGGTAC TGGTTTCCAG TATCACCAAT CCTTTTTGTT CCCTGGTAGT ACGCGGTATC
GAAGAAGAAG CCGAACGCCA CGGCTACCAC ATTTTGCTGT GCAACTCCGA ATCCAATCCA
ACCCGGGAGT CCGCCTATCT CAGCCTGCTG AGCGGTAAAG TGGTCGACGG CGTGATTACC
ATGGACGCCG TCAGTTGCCT GCCCGGCCTG ACCGCAATGA TTGGCGATTT TCCCTGGGTA
CAATGCGGCG AAGGCGATCC CGAGTTCCGT GCCTCTTCAG TCACCATCGA CAACCATCAG
GCGGCGAGGG CCGGCGTGCG TTATTTAGCT GCACGGGGCC GACGACGTAT TGCCCTGATC
AACAGCGACA TGCGCTATCT CTACTCGCAG CAGCGAGAGC AAGGTTATCG ACAGGCGCTG
GCCGAAGCCG GATTCGACTA TTGTCAGGTG GAATACGTCG AGGGGTTGGA ATATGCCGCC
GGTGCGTTGG CCATGGCTCG CCTGCTGGAT GCCGGGCCGC GACCGGATGC GGTATTCACC
ATCTCCGACG TGATCGCCGG TGGGGCGATG AGCACCCTGC ACCAACAGGG ATTGCGCATT
CCCGAAGATG TCGCGGTAAT GGGCTTTGAC GGCGTGCCAT TCGGGGCCGT CACCACGCCA
CCGCTGACCA CCGTCGAACA ACCGATGCAC CAGTTCGGCG TGCGCAGCGT GCAGTTGCTG
CTGGAAAAAA TCAAAAATCC GCAACAACCA CCGCGCAATG AAGTGCTTGA GTGGCGGCTG
GTTGAGCGTG GCTCAGCCTG A
 
Protein sequence
MSIEKVAKLA GVSAATVSRV LNGQQIVKPA TRDKVLAAIR ACDYQPNLLA RQLRTSRSRM 
LLVLVSSITN PFCSLVVRGI EEEAERHGYH ILLCNSESNP TRESAYLSLL SGKVVDGVIT
MDAVSCLPGL TAMIGDFPWV QCGEGDPEFR ASSVTIDNHQ AARAGVRYLA ARGRRRIALI
NSDMRYLYSQ QREQGYRQAL AEAGFDYCQV EYVEGLEYAA GALAMARLLD AGPRPDAVFT
ISDVIAGGAM STLHQQGLRI PEDVAVMGFD GVPFGAVTTP PLTTVEQPMH QFGVRSVQLL
LEKIKNPQQP PRNEVLEWRL VERGSA