| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4568 |
|---|
| Symbol | |
|---|
| ID | 5607163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 5042783 |
|---|
| End bp | 5043847 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640940134 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_001480789 |
|---|
| Protein GI | 157372800 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA TTCAGGGGCC GGGGCTGTTT CTGGCCCAGT TTATCGGCCC GCAGGCGCCG
TTTGATTCGC TGGACGGGTT GGCCGCTTGG GCCGCCGGGC TGGGGTTTAA AAGCCTGCAG
ATCCCGACCA CGTCCCCTGC TATTTTTGAT CTCAAGCGGG CGTCCCACAG TCAGGAGTAT
TGTGACGAGG TGCGCGCGTT GCTGGCGGGG CACGGCTTGG CGATCTCCGA GTTATCCACC
CATTTGCAGG GGCAACTGGT GGCGGTGCAT CCGGCTTACG ATCCGGCTTT TGACGGCTTT
GCTCCGGTTC AGGTGCGCGG CAATTCTCAG GCCCGGCAAG CATGGGCAAC GGAGCAATTG
CTGATGGCAG CACAGGCATC GCAGAGGTTG GGATTAGCCG CACACGTGAC TTTTTCTGGC
GCGCTGGCCT GGCCCTATTT TTACCCCTGG CCACCGCACA ATGCGCTGTT GCTGGAGGAA
GCCTTCGGGC AACTGGCACA GCGTTGGCGG CCGATCCTCG ATGCTTTTGA CGACGTCGGT
GTCGACCTTT GCTATGAACT GCACCCAGGG GAGGATCTGC ATGACGGTGT GACCTTTGAG
CGCTTTCTAC GGCAGGTTGG CAATCACCCG CGTTGCCATA TCCTGTATGA CCCCAGCCAT
CTGCATTTGC AGCAGATGGA CTATCTTGGC TTTATTGATG TTTATCACCC GCGCATTCGG
GCGTTTCACG TCAAGGATGC TGAATATCGG CCCAATGCTC GCAGCGGCGT GTATGGCGGT
TATCAGCCGT GGCTGGAAAG ACCCGGACGC TTTCGTTCAC TCGGCGATGG GCAGATCGAC
TTCCCGGCAA TTTTCAGCAA GCTGGCGCAG TACGATTTTC CCGGCTGGGC CACGCTGGAG
TGGGAGTGCT GTCTGAAATC GCCGGAGGCC GGTGCGCGGG AAGGGGCTGA GTTTATCGCC
CGCCATATTA TTCCAGTCGC TGAGAGGGCG TTTGATGATT TTGCCGCCGT CGGCGGTGAA
CGCAAACAGG TCAGACAGAT GTTGGGTGTG GGAGAGCAAC CATGA
|
|---|
| Protein sequence | MKTIQGPGLF LAQFIGPQAP FDSLDGLAAW AAGLGFKSLQ IPTTSPAIFD LKRASHSQEY
CDEVRALLAG HGLAISELST HLQGQLVAVH PAYDPAFDGF APVQVRGNSQ ARQAWATEQL
LMAAQASQRL GLAAHVTFSG ALAWPYFYPW PPHNALLLEE AFGQLAQRWR PILDAFDDVG
VDLCYELHPG EDLHDGVTFE RFLRQVGNHP RCHILYDPSH LHLQQMDYLG FIDVYHPRIR
AFHVKDAEYR PNARSGVYGG YQPWLERPGR FRSLGDGQID FPAIFSKLAQ YDFPGWATLE
WECCLKSPEA GAREGAEFIA RHIIPVAERA FDDFAAVGGE RKQVRQMLGV GEQP
|
|---|
| |