Gene Spro_4548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4548 
Symbol 
ID5607465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5024536 
End bp5025720 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content51% 
IMG OID640940114 
Productelongation factor Tu 
Protein accessionYP_001480769 
Protein GI157372780 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000312961 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.015065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTAAAG AAAAATTTGA ACGTTCCAAA CCGCACGTTA ACGTTGGTAC TATCGGCCAC 
GTTGACCACG GTAAAACTAC CCTGACTGCA GCAATCACCA CCGTTCTGGC TAAAACCTAC
GGCGGTTCTG CACGTGCTTT CGACCAGATC GATAACGCGC CAGAAGAAAA AGCTCGTGGT
ATCACCATCA ACACTTCTCA CGTTGAATAT GACACCCCAA GCCGTCACTA CGCGCACGTT
GACTGCCCAG GGCACGCCGA CTACGTTAAA AACATGATCA CCGGTGCTGC TCAGATGGAC
GGCGCTATCC TGGTTGTTGC TGCGACTGAC GGCCCTATGC CTCAGACCCG TGAGCACATC
CTGCTGGGTC GTCAGGTTGG CGTTCCTTTC ATCATCGTAT TCATGAACAA ATGTGACATG
GTTGATGATG AAGAGCTGCT GGAACTGGTA GAAATGGAAG TTCGTGAACT TCTGTCTGCT
TATGACTTCC CTGGTGATGA CCTGCCGGTT GTTCGTGGTT CAGCGCTGAA AGCACTGGAA
GGCGAAGCTG AGTGGGAAGC TAAAATCATC GAGCTGGCTG GCTACCTGGA TTCTTACATC
CCAGAACCAG AGCGTGCTAT CGACAAGCCG TTCCTGCTGC CAATCGAAGA CGTATTCTCC
ATCTCCGGCC GTGGTACTGT TGTTACCGGT CGTGTTGAGC GCGGTATCGT TAAAGTTGGC
GAAGAAGTTG AAATCGTTGG TATCAAAGAC ACCGTTAAGT CTACCTGTAC TGGCGTTGAA
ATGTTCCGCA AACTGCTGGA CGAAGGCCGT GCTGGTGAGA ACGTTGGTGT TCTGCTGCGT
GGTATCAAGC GTGAAGACAT CGAACGTGGT CAGGTACTGG CTAAACCAGG TTCTATCAAG
CCACACACCA AATTCGACTC AGAAGTTTAC ATCCTGAGCA AAGAAGAAGG TGGTCGTCAT
ACTCCATTCT TCAAAGGCTA CCGTCCACAG TTCTACTTCC GTACAACTGA CGTGACCGGT
ACCATCGAAC TGCCAGAAGG CGTTGAGATG GTAATGCCTG GCGATAACGT GAACATGGTT
GTTACCCTGA TTCACCCAAT CGCGATGGAC GACGGTCTGC GTTTCGCAAT CCGTGAAGGC
GGCCGTACTG TAGGCGCTGG TGTTGTTGCT AAAGTTATCG CTTAA
 
Protein sequence
MSKEKFERSK PHVNVGTIGH VDHGKTTLTA AITTVLAKTY GGSARAFDQI DNAPEEKARG 
ITINTSHVEY DTPSRHYAHV DCPGHADYVK NMITGAAQMD GAILVVAATD GPMPQTREHI
LLGRQVGVPF IIVFMNKCDM VDDEELLELV EMEVRELLSA YDFPGDDLPV VRGSALKALE
GEAEWEAKII ELAGYLDSYI PEPERAIDKP FLLPIEDVFS ISGRGTVVTG RVERGIVKVG
EEVEIVGIKD TVKSTCTGVE MFRKLLDEGR AGENVGVLLR GIKREDIERG QVLAKPGSIK
PHTKFDSEVY ILSKEEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNVNMV
VTLIHPIAMD DGLRFAIREG GRTVGAGVVA KVIA