| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4532 |
|---|
| Symbol | rplE |
|---|
| ID | 5606649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 5016891 |
|---|
| End bp | 5017430 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640940098 |
|---|
| Product | 50S ribosomal protein L5 |
|---|
| Protein accession | YP_001480753 |
|---|
| Protein GI | 157372764 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000349559 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000603292 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAC TGCATGATTA CTACAAAGAC GAGGTAGTCA AACAACTGAT GTCTCAGTTT
GATTACAACT CTGTCATGCA AGTCCCTCGG GTCGAGAAGA TCACCCTGAA TATGGGTGTT
GGTGAAGCGA TCGCTGACAA GAAACTGCTG GATAATGCAG CAGCGGATCT GGCAGCAATC
TCCGGTCAAA AGCCGTTCAT CACCAAAGCA CGCAAATCTG TTGCAGGCTT CAAAATCCGC
CAGGGCTATC CGATCGGCTG TAAAGTAACT CTGCGTGGCG AACGCATGTG GGAGTTCTTT
GAGCGACTGA TTTCCATTGC TGTTCCACGT ATCCGTGACT TCCGTGGCTT GTCCGCTAAG
TCATTCGATG GCCGTGGTAA CTACAGCATG GGTGTGCGTG AGCAAATCAT CTTCCCAGAA
ATCGACTACG ACAAAGTCGA TCGCGTTCGT GGTTTGGATA TTACCATTAC CACTACTGCG
AAATCTGATG ATGAAGGCCG CGCGCTGTTG GCTGCTTTTA ACTTCCCGTT CCGTAAGTAA
|
|---|
| Protein sequence | MAKLHDYYKD EVVKQLMSQF DYNSVMQVPR VEKITLNMGV GEAIADKKLL DNAAADLAAI
SGQKPFITKA RKSVAGFKIR QGYPIGCKVT LRGERMWEFF ERLISIAVPR IRDFRGLSAK
SFDGRGNYSM GVREQIIFPE IDYDKVDRVR GLDITITTTA KSDDEGRALL AAFNFPFRK
|
|---|
| |