| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4520 |
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| Symbol | rpsD |
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| ID | 5606667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 5011051 |
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| End bp | 5011671 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640940087 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001480742 |
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| Protein GI | 157372753 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000540597 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000609653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGCAAGAT ATTTGGGTCC TAAGCTCAAG CTTAGCCGCC GTGAGGGCAC AGACTTGTTC
CTGAAGTCTG GCGTTCGCGC GATCGATACC AAGTGTAAAA TTGAGCAACC GCCTGGTCAA
CACGGTGCGC GTAAACCGCG TCTGTCTGAC TATGGTGTAC AGTTACGTGA GAAGCAAAAA
GTTCGCCGTA TGTACGGTGT TCTGGAGCGT CAATTCCGTA ACTATTACAA AGAAGCAGCA
CGCCTGAAGG GCAACACCGG TGCAAACCTG TTGCAACTGC TGGAAGGTCG TTTGGACAAC
GTTGTTTACC GTATGGGCTT CGGCGCTACT CGTTCAGAGT CACGTCAGTT GGTTAGCCAC
AAAGCAATTA TGGTAAATGG TCGCGTTGTT AACATCGCTT CTTATCAGGT ATCTCCGAAT
GACGTAGTCA GCATCCGCGA GAAGGCTAAA AAGCAATCTC GTGTTAAAGC TTCTCTGGAG
CTGGCTGAGC AGCGTGAAAA GCCGACCTGG CTTGAAGTTG ATGCTGCTAA GATGGAAGGC
GTGTTCAAGC GTATGCCTGA ACGTACCGAT CTGTCTGCGG ACATTAACGA ACACCTGATC
GTCGAGCTTT ACTCCAAGTA A
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| Protein sequence | MARYLGPKLK LSRREGTDLF LKSGVRAIDT KCKIEQPPGQ HGARKPRLSD YGVQLREKQK
VRRMYGVLER QFRNYYKEAA RLKGNTGANL LQLLEGRLDN VVYRMGFGAT RSESRQLVSH
KAIMVNGRVV NIASYQVSPN DVVSIREKAK KQSRVKASLE LAEQREKPTW LEVDAAKMEG
VFKRMPERTD LSADINEHLI VELYSK
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