| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4519 |
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| Symbol | |
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| ID | 5606666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 5010036 |
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| End bp | 5011025 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640940086 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001480741 |
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| Protein GI | 157372752 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00027981 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000064627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAGGGTT CTGTGACAGA GTTTCTAAAA CCGCGCCTGG TAGATATCGA GCAAGTCAGT
TCGACGCACG CCAAGGTGAC CCTTGAGCCG TTAGAGCGTG GCTTTGGCCA TACTCTCGGC
AATGCACTGC GCCGTATTCT GCTTTCGTCT ATGCCGGGTT GCGCGGTGAC CGAGGTTGAG
ATTGATGGTG TACTGCATGA GTACAGCACC AAAGAAGGCG TACAGGAAGA TATCCTGGAG
ATCCTGCTCA ACCTGAAAGG GCTGGCGGTG AGAGTTCAAG GGAAAGATGA AGTTATCCTT
ACCCTGAATA AATCTGGCAT TGGCCCTGTG ACCGCTGCCG ACATTACCCA TGATGGTGAT
GTCGAAATCG TCAAGCCTCA GCACGTGATC TGCCACCTGA CCGATGAAAA CGCTGCTATC
AGCATGCGTA TCAAAGTTCA ACGTGGTCGT GGTTATGTGC CGGCTTCTGC CCGAATTCAT
TCGGAAGAAG ATGAGCGCCC GATCGGTCGT CTGTTGGTTG ACGCCTGCTA TAGCCCTGTA
GAGCGTATTG CCTACAATGT TGAAGCAGCG CGTGTAGAAC AGCGTACTGA CCTGGACAAG
CTGGTCATCG AAATGGAAAC CAATGGCACG ATCGATCCTG AAGAGGCGAT CCGCCGTGCG
GCTACCATCC TGGCTGAACA ACTTGAAGCT TTTGTTGACT TACGTGATGT TCGTCAACCA
GAAGTTAAAG AAGAGAAACC AGAATTCGAT CCGATTCTGC TGCGCCCTGT TGACGATCTG
GAATTGACTG TCCGCTCTGC TAACTGCCTT AAGGCAGAAG CTATCCACTA CATCGGTGAT
CTGGTACAGC GTACCGAGGT TGAGTTGCTG AAAACGCCGA ACCTGGGTAA AAAATCTCTT
ACTGAGATTA AAGACGTGCT GGCCTCCCGT GGACTGTCAC TGGGCATGCG CCTGGAAAAC
TGGCCACCGG CAAGCATTGC TGACGAGTAA
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| Protein sequence | MQGSVTEFLK PRLVDIEQVS STHAKVTLEP LERGFGHTLG NALRRILLSS MPGCAVTEVE
IDGVLHEYST KEGVQEDILE ILLNLKGLAV RVQGKDEVIL TLNKSGIGPV TAADITHDGD
VEIVKPQHVI CHLTDENAAI SMRIKVQRGR GYVPASARIH SEEDERPIGR LLVDACYSPV
ERIAYNVEAA RVEQRTDLDK LVIEMETNGT IDPEEAIRRA ATILAEQLEA FVDLRDVRQP
EVKEEKPEFD PILLRPVDDL ELTVRSANCL KAEAIHYIGD LVQRTEVELL KTPNLGKKSL
TEIKDVLASR GLSLGMRLEN WPPASIADE
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