| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4513 |
|---|
| Symbol | |
|---|
| ID | 5603907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 5005330 |
|---|
| End bp | 5006619 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640940080 |
|---|
| Product | 16S rRNA methyltransferase B |
|---|
| Protein accession | YP_001480735 |
|---|
| Protein GI | 157372746 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0528453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000468931 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA ATTACAATCT CCGCAGCATC GCAGCCATTG CCATCGGTCA GGTGTTGGAT
CAGGGCCAGT CACTCAGTAC TGTCCTGCCG TCACTGCAAA AAACCATTTC TGACAAGGAT
CGTGCTCTGC TGCAGGAACT GTGCTTTGGC ACCCTGCGCG TCCTGCCACA GTTGGAATGG
TGTATTCAAC AATTAATGGC CAAGCCAATG ACTGGCAAGC AGCGCACGCT GCACTATTTG
TTGATGGTCG GCTTATACCA ACTGCTGTAT ACCCGTATCC CCGCTCATGC GGTGCTGGCG
GAAACCGTAG AAGGCGCAGT AGCGCTGAAA CGCCCGCAGC TTAAGGGCCT GATCAACGGC
GTATTGCGCC AGTTCCAACG CCAGCAAGAA GAATTACTGC AACGCGCTGC CAATAATGAC
AGCCGCTATC TGCACCCGAG CTGGCTGTTG AAACGTATCC AGCAGGCCTA TCCCGCACAG
TGGGAGCAGA TCATCGATGC CAATAATCAG AAGCCGCCAA TGTGGCTGCG CGTCAACCGT
TTGCATCATA CTCGCGAAGA CTACTTGCAG TTGATGGAAC AGGCGGGCAT TGCCGCGGAA
CCTCATGCCG AATATCGCGA TGCGGTACGT TTGCTGGCAC CCTGCGCCGT TACCGACCTG
CCAGGCTTTG CCGACGGCTG GGTCACCGTG CAGGATGCCT CCGCGCAGGG CTGTGTCGAT
CTGCTGGATC CGCAAGACGG GGAACAGATC CTCGATTTGT GTGCGGCTCC CGGTGGAAAA
ACTACCCATA TTTTAGAGGC GGCTCCCAAA GCCCATGTGA TGGCCGTCGA TATCGATGAA
CAGCGCCTGA AGCGGGTCAA AGAAAACCTG CAACGTCTGC GTTTACACGC CGAAGTAAAG
CAAGGCGATG GCCGCACTCC GCAACAATGG TGCGGCGACA AGCAATTCGA TCGCATTTTG
CTGGATGCTC CTTGCTCTGC CACCGGTGTG ATCCGCCGTC ACCCAGATAT TAAATGGTTA
CGACGCGACA GTGATATCGC TGAACTGGCC GCGCTGCAGG CCGAGATTAT TGAGGCCATC
TGGCCGCATC TCAAAAGCGG AGGAGTGATG GTGTATGCCA CCTGCTCCAT CTTGCCGGCA
GAAAATGCTG AGCAGGTTAG CGCCTTCCTC CAGCGTCATG CCGATGCCCG TCTGGTTGAA
ACCGGCAACC AGCAGCAGCC TGGCCGACAG AATCTTCCGC ATCCAGAGGA TGGGGATGGC
TTCTTTTACG CTAAGCTGAT TAAAATGTAG
|
|---|
| Protein sequence | MKNNYNLRSI AAIAIGQVLD QGQSLSTVLP SLQKTISDKD RALLQELCFG TLRVLPQLEW
CIQQLMAKPM TGKQRTLHYL LMVGLYQLLY TRIPAHAVLA ETVEGAVALK RPQLKGLING
VLRQFQRQQE ELLQRAANND SRYLHPSWLL KRIQQAYPAQ WEQIIDANNQ KPPMWLRVNR
LHHTREDYLQ LMEQAGIAAE PHAEYRDAVR LLAPCAVTDL PGFADGWVTV QDASAQGCVD
LLDPQDGEQI LDLCAAPGGK TTHILEAAPK AHVMAVDIDE QRLKRVKENL QRLRLHAEVK
QGDGRTPQQW CGDKQFDRIL LDAPCSATGV IRRHPDIKWL RRDSDIAELA ALQAEIIEAI
WPHLKSGGVM VYATCSILPA ENAEQVSAFL QRHADARLVE TGNQQQPGRQ NLPHPEDGDG
FFYAKLIKM
|
|---|
| |