Gene Spro_4504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4504 
Symbol 
ID5606217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4992491 
End bp4993420 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content51% 
IMG OID640940066 
Producthomoserine O-succinyltransferase 
Protein accessionYP_001480726 
Protein GI157372737 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1897] Homoserine trans-succinylase 
TIGRFAM ID[TIGR01001] homoserine O-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.295159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00456401 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGATTC GTGTTCCTGA TGAGTTACCT GCAGTCAGTT TTTTGCGCAA TGAGAATGTC 
TTTGTCATGG CATCCTCTCG GGCAAAAACA CAGGAAATCA GGCCATTGAA AGTATTGATC
CTCAACCTGA TGCCAAAAAA GATCGAGACG GAAAACCAGT TTTTACGTCT ACTTTCCAAC
TCTCCGCTGC AAATCGACAT TCAGCTGCTG CGTATCGACA GCCGTGAGTC AAAGAACACG
CCGGCGGAGC ATTTGAATAA CTTTTACTGT GATTTTGAAG ATATTCAGGA TGAGAATTTC
GACGGATTGA TTGTCACCGG GGCGCCGCTG GGGCTGGTCG ATTTCTGTGA CGTTGCCTAC
TGGCCACAGA TCGAACGGGT GATTGACTGG GCCAAGAATC ACGTCACCTC CACGCTGTTT
GTATGCTGGG CGGTGCAGGC GGCATTGAAC ATTCTGTATG GTATTCCAAA GATGACGCGC
GAAGTGAAAC TGTCGGGGGT TTATCAGCAC CAGACGCTGC AGCAGCACGC CTTGCTGACT
CGCGGTTTTG ATGAGACCTT CCTCGCGCCT CACTCACGCT ATGCAGACTT TCCTACGGAG
ATTATCCGTC AGTATACGGA TCTGGATATC CTGGCCGAAT CAGAACAAAC CGGGGCCTAT
TTGTTCGCCA GTAAGGACAA GCGGCTGGCG TTTGTGACCG GTCACCCGGA GTATGATGCG
CTAACGTTAG CTGGCGAGTA TTGTCGCGAT AACGATGCCG GTCTTAATCC TGTGGTACCG
CTGAATTACT TCCCCGATGA TAACCCCGAA CTCACCCCCA AAGCGTCCTG GCGCAGCCAT
GGTCATCTGT TGTTTGCCAA CTGGCTCAAC TACTACGTTT ACCAGATCAC GCCGTACGAT
CTGCGTCATA TGAACCCTAC CCTCGAGTAA
 
Protein sequence
MPIRVPDELP AVSFLRNENV FVMASSRAKT QEIRPLKVLI LNLMPKKIET ENQFLRLLSN 
SPLQIDIQLL RIDSRESKNT PAEHLNNFYC DFEDIQDENF DGLIVTGAPL GLVDFCDVAY
WPQIERVIDW AKNHVTSTLF VCWAVQAALN ILYGIPKMTR EVKLSGVYQH QTLQQHALLT
RGFDETFLAP HSRYADFPTE IIRQYTDLDI LAESEQTGAY LFASKDKRLA FVTGHPEYDA
LTLAGEYCRD NDAGLNPVVP LNYFPDDNPE LTPKASWRSH GHLLFANWLN YYVYQITPYD
LRHMNPTLE