| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4503 |
|---|
| Symbol | |
|---|
| ID | 5606216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4990506 |
|---|
| End bp | 4992104 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640940065 |
|---|
| Product | malate synthase |
|---|
| Protein accession | YP_001480725 |
|---|
| Protein GI | 157372736 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2225] Malate synthase |
|---|
| TIGRFAM ID | [TIGR01344] malate synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00577319 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAC AGATAGTAGG CACGGAATTA ACGTTTACGC AGGGTTTTAG CGCTGCTGAA
CGACAGGTGT TGACGGATGA CGCGGTCGAA TTCCTGGCGG AATTGGTGAG TAAATTTACT
CCACAGCGTA ACAAACTGTT GGCTGCGCGT GCCTGCTGGC AGCAGAAGAT CGATCAAGGT
GAACGTCCAG ACTTCATTTC GGAAACTAAT TCCATTCGCA ATGAAAAGTG GTCGATCCGT
GGCATACCAG AGGATCTTCG CGACCGCCGG GTGGAAATCA CCGGTCCGGT TGAACGCAAG
ATGGTCATCA ACGCCCTGAA CGCCAATGTG AAGGTGTTTA TGGCGGACTT CGAAGACTCA
CTGGCACCGA GCTGGGACAA AGTCATCGAC GGCCAAATCA ACCTGCATGA CGCGGTGAAC
GGCACCATCT CTTACACCAA TGAAGCCGGC AAGATTTATC AGTTAAAGCC GAACCCGGCG
GTATTGATTG CTCGCGTACG CGGCCTGCAT TTGCCGGAAA AACACGTGCA ATGGCAGGGG
GAAGCGATCC CCGGTGGCCT GTTCGATTTT GCGCTGTATT TCTTCCATAA CTATCGTCAA
CTGCTGGCTA AAGGCAGTGG CCCTTATTTC TACCTGCCAA AAACCCAGTC CTGGCAGGAA
GCGGCCTGGT GGAGCGAAGT CTTCAGCTTT GCCGAGGATC GTTTCTCCCT GCCACGCGGC
ACGATCAAAG CCACGGTGCT GATCGAAACG CTGCCGGCAG TATTCCAGAT GGACGAGATC
CTCTACCACC TGCGCGATCA TATCGTCGGC TTGAACTGCG GCCGTTGGGA TTACATCTTC
AGCTACATCA AGACGCTGAA AAACCATGCT GACCGGGTAT TGCCGGATCG TCAGTCGGTC
ACCATGGACA AGTCATTCCT TAGCGCCTAT TCCCGATTGC TGATCAAGAC CTGCCACAAG
CGCGGTGCCT TTGCCATGGG CGGCATGGCG GCGTTTATCC CGAGCAAAGA CGCCGAGAAA
AATGCCTGGG TGCTGAACAA GGTGCGGGCG GATAAAGAGC TGGAGGCCAA TAACGGCCAC
GACGGTACCT GGGTGGCCCA TCCAGGGCTG GCGGATACCG TAATGGAAGT CTTCAGCCGG
GTGCTCGGTG AGCGCCGTAA CCAACTCGAA GTGCTGCGTG AAAACGACGC GCTAATCAGT
GCTGCGCAGT TGCTTGAACC TTGTGACGGG GAGCGTACCG AAGCCGGCAT GCGCGCCAAT
ATCCGCGTGG CGGTGCAGTA CATCGAAGCC TGGATCTCCG GCAATGGCTG CGTCCCGATT
TATGGCCTGA TGGAAGACGC GGCGACGGCG GAAATTTCCC GTACCTCTAT CTGGCAGTGG
ATCCACCATG AAAAGAGCCT GAGTGATGGC CAACTGGTCA CCAAGGCGCT GTTCCGTCAG
ATGCTGAAAG AAGAAATGCT GGTAGTACGT GAAGAGTTGG GTGAGGCACG CTTTAACGCT
GGCCGCTTCG ACGAAGCGGC ACGCCTGATG GAGCGTATCA CTACGCAAGA CGAATTAATC
GATTTCCTGA CTTTACCTGG CTATGAGCTA CTGGCCTGA
|
|---|
| Protein sequence | MTQQIVGTEL TFTQGFSAAE RQVLTDDAVE FLAELVSKFT PQRNKLLAAR ACWQQKIDQG
ERPDFISETN SIRNEKWSIR GIPEDLRDRR VEITGPVERK MVINALNANV KVFMADFEDS
LAPSWDKVID GQINLHDAVN GTISYTNEAG KIYQLKPNPA VLIARVRGLH LPEKHVQWQG
EAIPGGLFDF ALYFFHNYRQ LLAKGSGPYF YLPKTQSWQE AAWWSEVFSF AEDRFSLPRG
TIKATVLIET LPAVFQMDEI LYHLRDHIVG LNCGRWDYIF SYIKTLKNHA DRVLPDRQSV
TMDKSFLSAY SRLLIKTCHK RGAFAMGGMA AFIPSKDAEK NAWVLNKVRA DKELEANNGH
DGTWVAHPGL ADTVMEVFSR VLGERRNQLE VLRENDALIS AAQLLEPCDG ERTEAGMRAN
IRVAVQYIEA WISGNGCVPI YGLMEDAATA EISRTSIWQW IHHEKSLSDG QLVTKALFRQ
MLKEEMLVVR EELGEARFNA GRFDEAARLM ERITTQDELI DFLTLPGYEL LA
|
|---|
| |