Gene Spro_4502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4502 
Symbol 
ID5607462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4989151 
End bp4990458 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content59% 
IMG OID640940064 
Productisocitrate lyase 
Protein accessionYP_001480724 
Protein GI157372735 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0106696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCT CTCGTGCTCA ACAGATTCAA CAACTGGAAC AGGAATGGAA ATCGGCTCGC 
TGGGAAGGCA TCACCCGCCC GTACAGCGCG GAAGACGTCA TTAACCTGCG CGGTTCGGTT
AACCCGGTTT GCACCCTGGC ACAGAACGGT GCCGCCAAAC TGTGGGAACT GCTGCACGGT
AAATCACGCA AAGGCTACGT CAACAGTCTG GGGGCGCTCA CTGGCGGCCA GGCACTGCAG
CAGGCCAAGG CCGGCATCGA GGCGATTTAC CTGTCCGGTT GGCAGGTGGC GGCGGATGCC
AACACGGCGT CTGCGATGTA CCCGGACCAG TCGCTGTACC CGGTTGACTC TGTGCCGGGT
GTGGTTGAGC GCATCAACAA CACCTTCCGC CGCGCCGACC AGATCCAGTG GGCCAACAAA
ATTGAGCCGG GCAGCAAAGG TTACACCGAC TACTTCCTGC CGATCGTCGC CGATGCCGAA
GCCGGCTTTG GTGGCGTGCT GAACGCTTTC GAACTGATGA AGGCGATGAT TGAGGCCGGT
GCTGCCGGGG TGCACTTCGA AGACCAACTG GCGGCGGTGA AAAAGTGCGG TCATATGGGC
GGCAAAGTGC TGGTGCCAAC CCAGGAAGCG ATCCAGAAAT TGGTTGCTGC GCGCCTGGCG
GCCGATGTGC TCGGCGTGCC GACGTTAGTC ATCGCACGTA CCGATGCCGA TGCCGCCGAT
TTACTGACTT CTGACTGCGA CCCGTACGAC CGCGAGTTTG TGTCCGGTGA GCGCACTGCC
GAAGGTTTCT TCCGCACCCA TGCCGGTGTC GAGCAAGCGA TCAGCCGTGG CCTGGCATAT
TGCCCTTACG CTGACCTGGT GTGGTGCGAA ACCTCCACGC CGGATCTGCA GGCGGCCAAG
CGCTTTGCCG ATGCGATCCA TGCCAAATTC CCGGGCAAAC TGCTGGCGTA CAACTGCTCG
CCGTCATTCA ACTGGAAAAA GAACCTGGAC GACCAGACTA TTGCTCGCTT CCAGGAAGAG
CTGTCGGCGA TGGGCTACAA GTACCAGTTC ATTACGCTAG CGGGCATCCA CAGCATGTGG
TTCAACATGT TTGACCTGGC GCATGCCTAT GCACAGGGCG AAGGCATGAA ACACTACGTC
GAAAAAGTGC AGCAGCCAGA GTTCGACGCG GTGTCTCGCG GTTATACCTT TGCCTCACAC
CAACAGGAAG TGGGTACCGG TTACTTCGAC AAGGTGACCA CCATTATTCA GGGCGGTGCT
TCCTCAGTGA CGGCATTGAC CGGTTCTACG GAAGAACAGC AGTTCTGA
 
Protein sequence
MSTSRAQQIQ QLEQEWKSAR WEGITRPYSA EDVINLRGSV NPVCTLAQNG AAKLWELLHG 
KSRKGYVNSL GALTGGQALQ QAKAGIEAIY LSGWQVAADA NTASAMYPDQ SLYPVDSVPG
VVERINNTFR RADQIQWANK IEPGSKGYTD YFLPIVADAE AGFGGVLNAF ELMKAMIEAG
AAGVHFEDQL AAVKKCGHMG GKVLVPTQEA IQKLVAARLA ADVLGVPTLV IARTDADAAD
LLTSDCDPYD REFVSGERTA EGFFRTHAGV EQAISRGLAY CPYADLVWCE TSTPDLQAAK
RFADAIHAKF PGKLLAYNCS PSFNWKKNLD DQTIARFQEE LSAMGYKYQF ITLAGIHSMW
FNMFDLAHAY AQGEGMKHYV EKVQQPEFDA VSRGYTFASH QQEVGTGYFD KVTTIIQGGA
SSVTALTGST EEQQF