| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4499 |
|---|
| Symbol | |
|---|
| ID | 5607455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4984783 |
|---|
| End bp | 4986597 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640940061 |
|---|
| Product | phosphogluconate dehydratase |
|---|
| Protein accession | YP_001480721 |
|---|
| Protein GI | 157372732 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
|---|
| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0249015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATC CAACCCTATC CCGTGTCACA CAACGCATCA TCGACCGTTC CAAATCGAGC
CGTACCGCCT ATCTGGCACG CATTGAAGCA GCACGTTCAC AAACCGTACA TCGGGCCCAA
TTGGCCTGCG GTAATCTGGC CCATGGATTC GCCGCCTGCC AGCCGGATGA CAAAACTGCG
CTGAAAAATA TGGTGCGCAG CGATATCGCC ATCATTACCG CTTATAACGA CATGTTGTCC
GCCCACCAGC CCTACGAAAA CTACCCGCAA AAGCTTAAAC AGGCACTGCA CGCAGTAGGG
GCCGTCGGTC AGGTGGCCGG TGGCGTCCCA GCGATGTGCG ACGGTGTGAC TCAAGGACAG
GACGGCATGG AACTGTCACT GATGAGTCGT GACGTGATCG CCATGTCCTC CGCCATCGGC
CTGTCGCACA ATATGTTCGA CGGCGCGTTG TTCCTCGGCA TCTGTGACAA AATCGTACCG
GGACTGGTGA TGTCCGCCCT GTCCTTCGGC CATTTGCCGT CGCTGTTTGT CCCCGCCGGC
CCGATGAGCA GCGGCTTGCC GAACAAAGAG AAAGTCCGGG TGCGCCAACT GTATGCCGAA
GGCAAGGCCG ACCGTCTGGC ACTGCTGGAG GCCGAGGCCG CCTCCTACCA TGGCATCGGT
ACCTGCACTT TCTACGGCAC CGCCAACACC AACCAAATGG TGATGGAAGT GATGGGGCTG
CACCTGCCGG GTGCCTCTTT CGTCCACCCG GACACACCGC TGCGCGATGC GCTGACCGAT
GCCGCCGCAC GCCAGGTCAC TCGCCTGACC GAAACCGCCG GCAACTATCT GCCGATCGGC
CGACTGGTGG ATGAGAAGGT GGTGGTGAAC GGTATCGTTG CGCTGTTGGC TACCGGTGGC
TCCACCAATC TGACCATGCA CATGGTGGCA ATGGCTCGCG CCGCCGGCAT CATTATCAAC
TGGGATGATT TCTCCGAACT GTCGGACGCG GTGCCATTGT TATGTCGTAT CTACCCGAAC
GGCCCGGCGG ACATCAACCA ATTCCAGGCC TCGGGCGGCG TAGCCCTGGT GGTACGCGAA
CTGTTGAAAC ACGGCCTGCT GCACGAAGAC GTGCATACCG TGGCCGGTTT TGGCCTGACG
CGCTACACCC AGGAACCCTG GCTGGATAAT GGCCAACTGG CCTGGCGCGA GGGTGTGGAG
AGTTCGCTCG ACGCCCAGGT TATCGCCAGC GTGGCCGAAC CTTTCGAGCA CCACGGCGGT
ACCAAGGTGC TGGCCGGTAA CCTCGGTCGA GCGGTGATGA AAACCTCGGC AGTCCCCGCT
GAAAACCAGA TTATCGAAGC GCCGGCGGTG GTCTTTGAAA GCCAGCATGA CATCGTACCG
GCGTTTGAAG CCGGCAAACT GGATCGCGAT TGTGTGGTGG TGGTGCGCTT CCAGGGGCCT
CAGGCCAATG GCATGCCAGA ACTGCACAAA CTGATGCCGC CGTTGGGCGT ATTGATGGAC
CGTGGCTTTA AAGTGGCGCT GGTGACCGAT GGCCGCCTAT CCGGCGCTTC CGGCAAGGTT
CCGTCCGCCA TTCACGTGAC CCCGGAAGCC TACACCGGTG GCATGCTGGC CAAGGTGCAA
AACGGCGATC TGATCCGCGT AAATGGCCGC ACTGGCGAGT TGGCACTGTT GGTCGATGCC
GACCTGCTGG CCCAGCGCGC ACCTTATCAA CCCGACCTGA GCGCAGAACA CATCGGCTGT
GGCCGTGAAC TGTTCGGCGC CTTGCGCAGC CAGCTTTCCG GTGCCGAACA GGGTGCCTGC
TGCATTAAAT TTTAA
|
|---|
| Protein sequence | MINPTLSRVT QRIIDRSKSS RTAYLARIEA ARSQTVHRAQ LACGNLAHGF AACQPDDKTA
LKNMVRSDIA IITAYNDMLS AHQPYENYPQ KLKQALHAVG AVGQVAGGVP AMCDGVTQGQ
DGMELSLMSR DVIAMSSAIG LSHNMFDGAL FLGICDKIVP GLVMSALSFG HLPSLFVPAG
PMSSGLPNKE KVRVRQLYAE GKADRLALLE AEAASYHGIG TCTFYGTANT NQMVMEVMGL
HLPGASFVHP DTPLRDALTD AAARQVTRLT ETAGNYLPIG RLVDEKVVVN GIVALLATGG
STNLTMHMVA MARAAGIIIN WDDFSELSDA VPLLCRIYPN GPADINQFQA SGGVALVVRE
LLKHGLLHED VHTVAGFGLT RYTQEPWLDN GQLAWREGVE SSLDAQVIAS VAEPFEHHGG
TKVLAGNLGR AVMKTSAVPA ENQIIEAPAV VFESQHDIVP AFEAGKLDRD CVVVVRFQGP
QANGMPELHK LMPPLGVLMD RGFKVALVTD GRLSGASGKV PSAIHVTPEA YTGGMLAKVQ
NGDLIRVNGR TGELALLVDA DLLAQRAPYQ PDLSAEHIGC GRELFGALRS QLSGAEQGAC
CIKF
|
|---|
| |