| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4490 |
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| Symbol | metH |
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| ID | 5607180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 4972730 |
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| End bp | 4976359 |
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| Gene Length | 3630 bp |
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| Protein Length | 1209 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640940052 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_001480712 |
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| Protein GI | 157372723 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.816383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.548116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGGATG GCGGCATGGG CACCATGATC CAGAGCTATC GTCTGGAAGA GAGTGACTTT
CGTGGCGAGC GTTTTGCCGA CTGGCAGAGC GATCTGAAAG GCAATAATGA CCTGCTGGTG
CTAACCAAAC CGGAAGTGAT CACCGCCATT CACTACGGCT ACCTGGAAGC GGGGGCCGAC
ATTCTCGAAA CCAATACCTT CAACTCCACG TCCATCGCCA TGGCCGACTA CCATATGGAG
TCGCTGTCCG CCGAAATTAA CTATCAGGCC GCCTGCCTGG CACGAGCCTG TGCCGATGAA
TGGACCGCTC GCACGCCAGA GCAGCCGCGT TACGTGGCTG GGGTGCTGGG GCCTACCAAC
CGTACCGCTT CTATTTCACC GAACGTCAAC GATCCGGCGT TCCGTAATGT TTCTTTCGAT
GAGCTGGTGG AAGCCTACCG CGAATCGACG CGTGCGCTGG TGGAAGGCGG TGTCGATCTG
ATCATGATCG AAACCATCTT CGATACTCTG AACGCCAAAG CCGCCGCCTT CGCGGTGGAA
ACCGAATTTG AAGCCCTGGG CGTTGCGCTG CCGATCATGA TTTCCGGCAC CATCACCGAC
GCCTCCGGCC GTACCCTGTC GGGCCAGACC ACCGAAGCCT TCTATAACTC AATGCGCCAC
GTCAAGCCGC TGAGCTTTGG CCTGAACTGT GCGCTGGGCC CGGACGAACT GCGCCAATAC
GTTTCTGAGC TGTCGCGTAT CTCGGAAAGC TACGTCACCG CTCACCCCAA CGCCGGGTTA
CCCAACGCCT TCGGCGAATA CGATCTGGAC GCGCAAGAGA TGGCGAAACA GGTCGGCGAG
TGGGCGAATG CCGGCTTCCT GAATATTATC GGTGGCTGCT GCGGCACCAC GCCGGAACAC
ATTGCCGCGA TGGTCAAGGC CGTGGCGGGT GTGCCACCGC GTCAACTGCC GGCGATCCCG
GTCGCCTGCC GTCTGGCCGG CCTTGAGCCG TTGAACATTG ACGCCAAGAC GCTGTTCGTC
AACGTGGGCG AGCGTACCAA CGTCACCGGT TCCGCCCGCT TTAAGCGGCT GATCAAAGAA
GAGAAATACA GTGAAGCGTT AGCCGTTGCC CGCCAGCAGG TGGAAAGCGG CGCACAGATT
ATCGATATCA ACATGGATGA GGGGATGCTC GACGCCGAAG CGGCGATGGT GCGTTTCCTC
AACCTGATTG CCGGTGAACC GGATATTGCC CGCGTGCCGA TCATGATCGA TTCTTCCAAA
TGGTCGGTGA TCGAGAAAGG CCTGAAGTGT ATTCAGGGCA AAGGCATTGT TAACTCTATC
TCGATGAAAG AGGGCGAAGA GGCCTTTATC CACCACGCCA AACTGGTGCG CCGCTACGGT
GCTGCGGTCG TGGTGATGGC ATTTGACGAG GCAGGCCAGG CGGATACCCG CGAGCGCAAG
TTCGAGATTT GTCGCCGCGC TTATAAAATC CTGACCGAGC GCGTCGGCTT CCCGCCGGAA
GACATCATTT TTGACCCGAA TATTTTTGCC GTCGCCACCG GTATCGATGA GCATAACAAC
TATGCCGTCG ACTTTATCGA AGCCTGTGCC GACATCAAAA CCCACCTGCC GCACGCGATG
ATCTCCGGTG GGGTGTCCAA CGTGTCGTTC TCATTCCGCG GTAACGATCC GGTGCGTGAG
GCGATCCACG CGGTATTCCT GTATCACGCG ATCCGCAACG GCATGGATAT GGGTATCGTT
AACGCCGGGC AGTTGGCGAT CTACGACGAT CTGAGCGCCG AACTGCGCGA TGCGGTGGAG
GACGTGATCC TCAATCGCCG CGACGACGGC ACCGAGCGGC TGCTGGAGCT GGCGGAAAAA
TACCGCGGCA GCAAAGACAA CGAAGTGGCG GTGCAGCAGG CTGAATGGCG CGGCTGGCCG
GTCGAAAAAC GGCTGGAATA TTCACTGGTC AAAGGGATTA CCGAGTTTAT CGAACTGGAT
ACCGAAGAAG CGCGCCAGCG TGCGGATCGT CCGATCGAAG TGATCGAAGG GCCGCTGATG
GCAGGCATGA ACGTGGTCGG TGACCTGTTC GGCGAAGGCA AGATGTTCCT GCCGCAGGTG
GTGAAATCCG CCCGGGTGAT GAAGCAGGCG GTGGCCTATC TGGAGCCGTA CATCGAGGCC
AGCAAGGAGA AAGGGACGAC GGCGGGTAAA ATCCTGCTGG CGACGGTGAA GGGCGATGTA
CACGACATCG GTAAAAATAT CGTCGGCGTG GTGTTGCAGT GCAACAACTA CGAAATTGTC
GATTTGGGCG TGATGGTGCC GACGGAGAAA ATCCTGAAAA CCGCGCGTGA GCAGAACGTC
GATATCATCG GCCTGTCGGG GCTGATTACC CCGTCGCTGG ACGAGATGGT CAACGTGGCT
AAAGAGATGG AGCGTCAGGG CTTTACCCTG CCGTTGCTGA TCGGCGGTGC CACGACGTCC
AAGGCCCATA CCGCGGTGAA GATTGAGCAA AATTACAGTG GCTCAACCAC CTACGTGCAA
AATGCCTCAC GCACCGTGGG GGTGGTGTCG GCACTGCTTT CCGCCACCCA ACGCGACGAT
TTCGTGGCGC GAACCCGTAA AGAATATGAA ACCGTGCGCA TCCAGCATGC GCGTAAAAAA
CCGCGCACTC CACCGGTCGA CCTGCAAAAA GCGCGCGATA ACGCCATGGT GCTGGATTGG
GAAAGTTATC AGCCGCCGGT GCCGAAACGG TTGGGCGTTT ACCCGGTTGA AGCCGGTATA
GAAACGCTGC GTCATTACAT CGACTGGACG CCGTTCTTTA TGACCTGGTC GCTGGCGGGT
AAATACCCGC GCATTCTGGA AGATGAAGTG GTGGGTGAAG AGGCCAAACG GCTGTTCGCC
GACGCCAACC AGATGCTGGA CATGCTTGCC GCCAACGGCA GCCTCAACCC GCGCGGCGTC
TATGGCCTGT TCCCGGCCAA CCGCGTCGGC GACGATGTGG AGGTGTACCG CGACGAAAAC
CGTGATGAGG TGCTGGTGGT CAGCCGCCAC CTGCGCCAGC AGACGGAAAA AACCGACTTC
CCGAACTACT GTCTGGCGGA CTTTGTCGCG CCGAAAAGCA GTGGCAAGGC CGACTACTTC
GGAGCCTTCG CGGTGACCGG CGGTCTGGAA GAGGATGACC TGGCGGCGGC CTATGATGCA
CAGCACGATG ATTACAATAA AATCATGGTG AAGGCGCTGT CGGATCGTCT GGCGGAGGCT
TTCGCCGAGT ACCTGCACGA GCAGGTGCGC AAGCTGCACT GGGGTTTCGC GGCGGAAGAG
AACCTGAGCA ACGAAGAGCT GATCCGCGAA AATTATCAGG GCATCCGCCC GGCTCCGGGC
TATCCGGCCT GCCCGGAACA CACCGAGAAA GCGGAAATCT GGCGCCTGCT GGACGTTAAC
CGCCACACCG GTATGGTGTT GACCGAATCC TTCGCCATGT GGCCGGGGGC GGCGGTGTCC
GGCTGGTACT TTAGCCACCC GCAAAGCAAG TATTTTGCAG TAGCCCAGCT CCAGCGCGAT
CAGGTGGAAG ACTATGCGGC GCGTAAAGGC ATGAGCGTCA GCGAGGTTGA ACGCTGGCTG
GCACCCAACC TCGGCTACGA CGCCGACTGA
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| Protein sequence | MLDGGMGTMI QSYRLEESDF RGERFADWQS DLKGNNDLLV LTKPEVITAI HYGYLEAGAD
ILETNTFNST SIAMADYHME SLSAEINYQA ACLARACADE WTARTPEQPR YVAGVLGPTN
RTASISPNVN DPAFRNVSFD ELVEAYREST RALVEGGVDL IMIETIFDTL NAKAAAFAVE
TEFEALGVAL PIMISGTITD ASGRTLSGQT TEAFYNSMRH VKPLSFGLNC ALGPDELRQY
VSELSRISES YVTAHPNAGL PNAFGEYDLD AQEMAKQVGE WANAGFLNII GGCCGTTPEH
IAAMVKAVAG VPPRQLPAIP VACRLAGLEP LNIDAKTLFV NVGERTNVTG SARFKRLIKE
EKYSEALAVA RQQVESGAQI IDINMDEGML DAEAAMVRFL NLIAGEPDIA RVPIMIDSSK
WSVIEKGLKC IQGKGIVNSI SMKEGEEAFI HHAKLVRRYG AAVVVMAFDE AGQADTRERK
FEICRRAYKI LTERVGFPPE DIIFDPNIFA VATGIDEHNN YAVDFIEACA DIKTHLPHAM
ISGGVSNVSF SFRGNDPVRE AIHAVFLYHA IRNGMDMGIV NAGQLAIYDD LSAELRDAVE
DVILNRRDDG TERLLELAEK YRGSKDNEVA VQQAEWRGWP VEKRLEYSLV KGITEFIELD
TEEARQRADR PIEVIEGPLM AGMNVVGDLF GEGKMFLPQV VKSARVMKQA VAYLEPYIEA
SKEKGTTAGK ILLATVKGDV HDIGKNIVGV VLQCNNYEIV DLGVMVPTEK ILKTAREQNV
DIIGLSGLIT PSLDEMVNVA KEMERQGFTL PLLIGGATTS KAHTAVKIEQ NYSGSTTYVQ
NASRTVGVVS ALLSATQRDD FVARTRKEYE TVRIQHARKK PRTPPVDLQK ARDNAMVLDW
ESYQPPVPKR LGVYPVEAGI ETLRHYIDWT PFFMTWSLAG KYPRILEDEV VGEEAKRLFA
DANQMLDMLA ANGSLNPRGV YGLFPANRVG DDVEVYRDEN RDEVLVVSRH LRQQTEKTDF
PNYCLADFVA PKSSGKADYF GAFAVTGGLE EDDLAAAYDA QHDDYNKIMV KALSDRLAEA
FAEYLHEQVR KLHWGFAAEE NLSNEELIRE NYQGIRPAPG YPACPEHTEK AEIWRLLDVN
RHTGMVLTES FAMWPGAAVS GWYFSHPQSK YFAVAQLQRD QVEDYAARKG MSVSEVERWL
APNLGYDAD
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