Gene Spro_4488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4488 
Symbol 
ID5607178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4970729 
End bp4971790 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content58% 
IMG OID640940050 
Productextracellular solute-binding protein 
Protein accessionYP_001480710 
Protein GI157372721 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.404976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.627866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT TGTGCGCTTC TGTGTTAACC AGTGCCATTA TCCTGTCCAG CCAGACCAGC 
TGGGCTGCCG ATTCCGATCT GGCGGCGCTG GCACAGGCTG CCAAGAAGGA AGGGGAAGTC
AACAGCGTCG GCATGCCGGA CAGCTGGGCC AACTGGAAAG ACACCTGGCA GGATCTGCTC
AGCAAGTACG GCCTGAAACA TGCCGATACC GACATGAGCT CGGCGCAGGA AATCGCCAAG
TTCGATGCCG AAAAGAGCAA CGCTACGGCG GATATCGGTG ATGTGGGCGC GGCATTCGGC
CCGATCGCGG TACAAAAAGG GGTGACCCAG CCGTACAAGC CATCCACCTG GGAGCAGGTG
CCTGACTGGG CGAAAGACAA AGACGGTCAT TGGGCGCTGG CCTATACCGG CACCATTGCT
TTCATCATCA ACAAGAAACA GGTGAAAGAG ATCCCGCATA GCTGGGCGGA TTTGCTGAAA
GGAACCTATC AGGTCACTAT CGGTGACGTG GGTACCGCCT CGCAGGCGGC CAGCGGCGTA
TTGGCGGCCA CTTACGCCAT GGGCGGCAAT GAGAAGAACC TGAAGCCGGG CCTGGAATTC
TTCGGCAAGC TGGCGAAAGC CGGCCGTTTG AGCCTGAGCA ACCCGGTGAT CGCCTCACTG
GAAAAAGGCG AAGTCCAGGT CGGCGTAGTT TGGGACTTTA ACGGCCTTAA CTACCGTGAC
CAGATCGACA AAACCCGCTT TGAAGTGCTG ATCCCGTCCG ACGGCTCAAT CACCTCAGGC
TACACCACCA TCATCAACAA ATACGCCAAG CACCCGAACG CCGCCAAGCT GGCGCGTGAA
TACATCTTCT CCGACGCCGG CCAGATCAAC CTGGCGCGTG GCTACGCCCG TCCCATCCGT
GCCGAACATC TGACGCTGCC GGACGATGTC AAAGCCAAGC TGTTGCCTGC TGAACAATAT
AAAAATGCTC ACCCAATCGC CGATCCGGCG GCCTGGGAGC AAAGCGCCAA AACGCTGCCG
CGCCAGTGGC AGGAAAACGT CATTATGTTT ATGCAGCAGT GA
 
Protein sequence
MKRLCASVLT SAIILSSQTS WAADSDLAAL AQAAKKEGEV NSVGMPDSWA NWKDTWQDLL 
SKYGLKHADT DMSSAQEIAK FDAEKSNATA DIGDVGAAFG PIAVQKGVTQ PYKPSTWEQV
PDWAKDKDGH WALAYTGTIA FIINKKQVKE IPHSWADLLK GTYQVTIGDV GTASQAASGV
LAATYAMGGN EKNLKPGLEF FGKLAKAGRL SLSNPVIASL EKGEVQVGVV WDFNGLNYRD
QIDKTRFEVL IPSDGSITSG YTTIINKYAK HPNAAKLARE YIFSDAGQIN LARGYARPIR
AEHLTLPDDV KAKLLPAEQY KNAHPIADPA AWEQSAKTLP RQWQENVIMF MQQ