Gene Spro_4486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4486 
Symbol 
ID5606527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4969071 
End bp4969910 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content57% 
IMG OID640940048 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001480708 
Protein GI157372719 
COG category[R] General function prediction only 
COG ID[COG4132] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.448719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA AGTGGATTGC CGCCTTGTGC CTGTTGCCGT TTATCCTGCT GTTTGGTGCG 
TTCCAAATCG CGCCGCTGGT GTGGATTGCG GTCAGCAGTT TTTTCAGCCA AACCAGCGGC
TGGGGGCTGG GCAACTATGT TGATGTGTTG ACCTCGCCGT TCTATCTGCA GGCGTTTCAG
TTCTCGCTGG AGATTTCTCT CTGGTCGAGC GTCTATGGGC TGTTAATCGC CCTGGTGGGC
AGTTACTCAC TGCGCCAGCT GGGTCAGACG CGGTTCCATG ATTTTGTGAT GTCGTTTACC
AACATGACCA GCAACTTCGC CGGGGTGCCG CTGGCGTTTG CCTTCGTCAT CCTGCTGGGG
CTGAATGGCT GCCTGACGCT ACTGCTGCGC AAATACGGCC TGATGGAGAG TTTTAACCTT
TATTCCAAAA CCGGGCTGAT TGTGCTCTAC ACCTACTTCC AGATCCCGCT CGGCGTGCTG
CTGCTGTACC CGGCGTTTGA TGCGCTGCGT GAAGACTGGC GCGAATCGGC ATCTTTGCTC
GGAGCCAGTC CGTGGCGCTA TTGGCGGCAT ATCGGCTTGC CGGTGCTGGC ACCGGCGCTG
ATGGGCACCT TTGTCATCCT GCTGGCCAAC GCATTGGGTG CTTATGCCAC TGTGTATGCG
CTGACCACCG GCAATTTTAA CGTTATCCCC ATCCGGATCT CGGCGCTGGT GGCGGGGGAC
ATCTCTCTCG ATCCTAACCT GGCCAGCGCG CTGGCGATGC TGCTGGTGGC GATGATGGCG
TTTATCACTC TGATCCATCA GTGGCTGCTG CGCAGGAGTT ACCTCAATGC ACGCTCATAA
 
Protein sequence
MKAKWIAALC LLPFILLFGA FQIAPLVWIA VSSFFSQTSG WGLGNYVDVL TSPFYLQAFQ 
FSLEISLWSS VYGLLIALVG SYSLRQLGQT RFHDFVMSFT NMTSNFAGVP LAFAFVILLG
LNGCLTLLLR KYGLMESFNL YSKTGLIVLY TYFQIPLGVL LLYPAFDALR EDWRESASLL
GASPWRYWRH IGLPVLAPAL MGTFVILLAN ALGAYATVYA LTTGNFNVIP IRISALVAGD
ISLDPNLASA LAMLLVAMMA FITLIHQWLL RRSYLNARS