Gene Spro_4478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4478 
Symbol 
ID5602563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4953857 
End bp4955665 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content59% 
IMG OID640940040 
Productsodium/hydrogen exchanger 
Protein accessionYP_001480700 
Protein GI157372711 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAT CTGCCCCGTT GATGTTGGTG GTTATTGGAT TGAGTTCGCT GCTGGCGCAG 
TGGCTGGCCT GGCTGTTACG CCTGCCGGCC ATTCTGCCGC TGCTGGTGTT TGGCGTGGTA
CTGGGCCCGG TGGTGCATTG GGTCCAGCCG GACGCGCTGT TTGGCGATTT GCTGTTCCCG
CTGGTGTCGC TGTCGGTCGC CATTATTCTG TTCGAAGGCG CGCTGACGCT GCGGGTCGAG
GAAATTCGTG GCCTGGGTGG CGTAGTGCGC AACCTGGTAA CCATCGGCAT GCTGATGACC
TTTCTGGTGA TTGGCGTGGC CTGCTGGTGG CTGCTGGACT TTCCGCCCGA ACTGGCGGCG
CTGATCGGTG CGGTAACGGT GGTCACCGGC CCGACGGTGA TCGCCCCGCT GATGCGGGTG
GTGCGACCCA ACGCCAATAT CAACCAGGTG CTGCGCTGGG AAGGGATAGT GATCGACCCG
GTCGGCGCTA TCTTCACCCT GCTGGTGTTT GAATTTATCG TACTGAAACA GCATTCGGAA
TCTTACACCC ACCTGTTCTA CACCCTGGGT ATTACCGCCG CCGTCGGTCT GGTGGCCGGC
GCACTGTTCG GTTACCTGCT GGGCGTGGCG CTACGCCGTG TCTGGCTGCC GGGCTACCTG
CAAAACCTGG CGGTGCTGGC AATTATGCTC ACCGCTTTTG GCCTGTCCAA CGCCATTGCC
GACGAGTCCG GCCTGCTGAC CGTCACGGTG ATGGGCATTT GGCTGGCCAA TATGCGCGAT
GTCGATACCA GCGACATCCT GGCATTTAAA GAAGAGCTGT CGGCGATCCT GATTTCGGCG
CTGTTTATCA TTTTGGCGGC ACGGCTTGAT ATCCAGGCGT TGTGGAATAT GGGCTGGCCG
CTGCTGGGCC TGCTGCTGGT GGTGCAGTTT ATTGCAAGGC CGCTGTGTAT TGCGGTGTCG
ACCTGGCGCT CCTCCCTGCA CTGGCGCGAT CGGCTGCTGC TGTGCTGGAT TTCGCCACGC
GGTATCGTTG CTGCGGCGGT CAGTTCACTG TTCGCCCTGA CCTTGCAACG CAGCGGTTAT
CCAGGAGCCG ATCGCCTGGT GACCGTGGTG TTCGCCGTGA TCATCGGTAC CGTGGTGCTG
CAAAGCCTGA CCAGCAGCAT GATGGCACGC TGGTTGCGGG TACAGCAGCA AAAACCACGC
GGCGTGCTGA TCGTCGGCGC CAACAGCGTG GCGCGCATGC TGGCGCAGGC GTTGATAAAA
ATGAATATCC CGGTGATCGT CACCGACAGC AGTTGGGAGT ATTACCGCCA GGCGCGTATG
GACGGCATCC CCGCCTATTA TGGCCATGCT TACTCCGAAC ATGCCGAGAA CTACCTCGAT
CTCAGCGATA CCGCGCAGGT GCTGGCCCTG TCGCCCAACC GCCATCAGAA TGCGCTGGCG
GTCTATCACT TTGGCCATAT TTTTGGCGAC GGGCAGGTGT TCGCCATCCG CTCCGGCGCC
CCGCTGAAAG GTCGCGGCAA CAGTGGTGAA AGCTCGCGCT TTCGTCGGCA TGAAGTTTTA
TTTAATCAAG AAGCCACTTA TGGCCGCTTA AGCAGTCTGA TCGCCCAGGG GGCGACCATC
AAGGCCACCA AGCTGAACGA GAACTTTGGC TGGCTGGAAT ATCTTGAGAA ACATCAGGGC
GTTATTCCGC TATTCAGTCA GCGCGAGGAC GGCACTTTGC AGCCGATCGG TACCGGTTTC
GTCCCGGCGA TGCCCTGTAC GCTGATTGCA CTGGTACAAG ATGAAAATCC CTCAACGTCC
GGACGTTGA
 
Protein sequence
MELSAPLMLV VIGLSSLLAQ WLAWLLRLPA ILPLLVFGVV LGPVVHWVQP DALFGDLLFP 
LVSLSVAIIL FEGALTLRVE EIRGLGGVVR NLVTIGMLMT FLVIGVACWW LLDFPPELAA
LIGAVTVVTG PTVIAPLMRV VRPNANINQV LRWEGIVIDP VGAIFTLLVF EFIVLKQHSE
SYTHLFYTLG ITAAVGLVAG ALFGYLLGVA LRRVWLPGYL QNLAVLAIML TAFGLSNAIA
DESGLLTVTV MGIWLANMRD VDTSDILAFK EELSAILISA LFIILAARLD IQALWNMGWP
LLGLLLVVQF IARPLCIAVS TWRSSLHWRD RLLLCWISPR GIVAAAVSSL FALTLQRSGY
PGADRLVTVV FAVIIGTVVL QSLTSSMMAR WLRVQQQKPR GVLIVGANSV ARMLAQALIK
MNIPVIVTDS SWEYYRQARM DGIPAYYGHA YSEHAENYLD LSDTAQVLAL SPNRHQNALA
VYHFGHIFGD GQVFAIRSGA PLKGRGNSGE SSRFRRHEVL FNQEATYGRL SSLIAQGATI
KATKLNENFG WLEYLEKHQG VIPLFSQRED GTLQPIGTGF VPAMPCTLIA LVQDENPSTS
GR