Gene Spro_4466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4466 
Symbol 
ID5607085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4938948 
End bp4939949 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content61% 
IMG OID640940028 
ProductLacI family transcription regulator 
Protein accessionYP_001480688 
Protein GI157372699 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATAATC AATCCGCGCG GCGTATCACC CGCGCCGACG TCGCCCGCGT AGCGGGCACC 
TCGGTCGCGG TAGTCAGCTA TGTGATCAAT AACGGTCCGC GCCCGGTGGC AGAAGCTACC
CGTTTGCGGG TGCTGGCGGC GATCGAGCAA ACCGGTTACC GGCCGAACGA CATCGCCCGG
GCGCTGGCTT CGGGCAATAC TCTGACTTAT GGATTAGTGG TTCCCGATAT TTCCAACCCG
TTTTTTGCCT CAATGGCACG GGCACTGCAG CGTGAAGCCT TCAACCATGG CCGCGTGCTG
CTGTTGGGGG ACGCCGGCGA CGACCGGCAG CACGAGCACG ACCTGATTAA CCACCTGCTG
CGCCGTCAGG TTGACGGGCT GCTGTATACC AGCGTCGATC GTCATCCCTG GTTTGATCTG
ATCCGCAATT CCGGCACCCC CTGCGTGATG ATAGATACCA TCGACAGCCA TGCCGGTATC
AGCGCCATCC GCGTTAATGA ACGCGACGCC GCCTGCCAGG CCACACGCCA TCTGTTGCAG
CACGGCTACC GGGAGCTCGG TATTTTTGTT GGCCCGCTGA CCATGCTCAA CGCACAAGAT
CGCCTTAACG GCTGGCGTGA CGCGCTGATT GAGGCGGGTA TTACGCCGCG TGAAGAATGG
ATTTTTGAAG CCCCCTATAC CCGCAAGGGC GGCTATCAGG CCAGCCAGAA AATGCTGCAA
GGCCCCTGCC CACGCGCCAT CTTCACCTCC AACGAACAAC AGGCGCTCGG CTGTCTGTCA
GCGCTGGCGG AACATCAACT GCGCGTGCCG GACGATCTGG CTATCATTTG CTTTAACGGC
ACCCAACAAT CCGAATTCAG CGTGCCGCCG CTCAGCGCGG TCGAACAACC GATCGACGCC
ATGGCCAGGC AGGCCATCGC CATGTTGGCC ACCGGTACCG CGCAGCCAGA ACTGCACGAA
TTCGCCTTCC AGCTGCATAT CCGCCGATCG TGCGGCTGCT AG
 
Protein sequence
MDNQSARRIT RADVARVAGT SVAVVSYVIN NGPRPVAEAT RLRVLAAIEQ TGYRPNDIAR 
ALASGNTLTY GLVVPDISNP FFASMARALQ REAFNHGRVL LLGDAGDDRQ HEHDLINHLL
RRQVDGLLYT SVDRHPWFDL IRNSGTPCVM IDTIDSHAGI SAIRVNERDA ACQATRHLLQ
HGYRELGIFV GPLTMLNAQD RLNGWRDALI EAGITPREEW IFEAPYTRKG GYQASQKMLQ
GPCPRAIFTS NEQQALGCLS ALAEHQLRVP DDLAIICFNG TQQSEFSVPP LSAVEQPIDA
MARQAIAMLA TGTAQPELHE FAFQLHIRRS CGC