Gene Spro_4460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4460 
Symbol 
ID5606673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4931958 
End bp4932566 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content56% 
IMG OID640940022 
ProductLexA repressor 
Protein accessionYP_001480682 
Protein GI157372693 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC TAACTACCAG ACAGCAAGAG GTCTATGATC TGATTCGCGA TCATATTTCG 
TCCACTGGCA TGCCGCCAAC GCGCGCCGAG ATCGCCATGC GTCTGGGGTT CCGTTCGCCA
AATGCCGCAG AAGAACACCT GAAAGCGCTG GCGCGTAAAG GCGTTATCGA GATTATCTCC
GGCGCTTCGC GCGGCATTCG CCTGCTAATG GAAGATGAAG AGGGTTTACC GCTGATTGGC
CGTGTCGCCG CCGGTGAGCC GCTGCTGGCG CAGCAGCATA TCGAAGGGCA CTACAAGGTC
GATCCATCCC TGTTCAAACC GAGCGCGGAT TTCCTGCTGC GGGTCAACGG CATGTCGATG
CGTGACATCG GTATTCTCGA CGGCGATCTG CTGGCGGTGC ATAAAACTCA GGACGTGCGT
AATGGCCAGG TGGTTGTGGC ACGCATTGAA GATGAAGTCA CGGTCAAGCG CCTGAAAAAA
CACGGTAATG TGGTTGAGCT GCTGCCGGAA AACAGTGAAT TCCAGCCGAT TGTGGTCGAT
CTGCGTCAGC AGAATTTCAC CATTGAAGGT CTGGCGGTCG GTGTGATCCG CAATGGCGAC
TGGGTTTAA
 
Protein sequence
MKALTTRQQE VYDLIRDHIS STGMPPTRAE IAMRLGFRSP NAAEEHLKAL ARKGVIEIIS 
GASRGIRLLM EDEEGLPLIG RVAAGEPLLA QQHIEGHYKV DPSLFKPSAD FLLRVNGMSM
RDIGILDGDL LAVHKTQDVR NGQVVVARIE DEVTVKRLKK HGNVVELLPE NSEFQPIVVD
LRQQNFTIEG LAVGVIRNGD WV