Gene Spro_4445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4445 
Symbol 
ID5604259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4918284 
End bp4919477 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content57% 
IMG OID640940007 
Productaromatic amino acid aminotransferase 
Protein accessionYP_001480667 
Protein GI157372678 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.451024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTCAGA ACGTTGATGC CTATGCAGGT GACCCGATCC TGTCGCTGAT GGAAAAATTC 
AAAAAAGATC CCCGTTCGCA CAAGGTTAAC CTGAGTATCG GCCTTTACTA TGACGAGCAG
GGCATTATCC CGCAGATGAA GGCGGTTGCC GCCGCAGAAG CGCAACTGAG CAGCGTGGAT
CACGGCGCGT CAGTATACCT GCCGATGGAA GGCCTGCAGC CTTACCGTAT TGCCATTCAG
CATCTGCTGT TTGGCGCCGA GCACCCGATG TTGCAACAGG AGCGTATCGC CACCATTCAA
ACCGTGGGCG GTTCCGGCGC GCTGAAGGTC GGTGCCGACT TCCTGAAAAG CTATTTCCCG
GATTCGCAGG TGTGGGTCAG CGATCCGACC TGGGAAAACC ACATCGCCAT CTTTGGCGGT
GCCGGCTTCA AGGTCAATAC CTATCCCTAC TTCGACAGCG AAAGCCTGGG CGTGAAGTTT
GACGCCATGC TGAGCGCATT GAAACAGTTG CCGAAGCACA GCATCGCGCT GCTGCACCCA
TGCTGCCATA ACCCGACCGG CTCTGACCTG ACTCATGCCC AGTGGGATGA AGTGGTCAAA
GTGATTGCCG AACGTGAACT GATCCCGTTC CTTGATATCG CCTATCAGGG TTTTGGCGGT
GGAATTGCCG ATGATGCCTA TGCCATCCGC ACTATGGCTG CGGCCGGTCT GCCATGCCTG
GTAAGTAATT CGTTCTCGAA AATCTTCTCG CTGTACGGCG AACGCGTCGG CGGCCTGTCG
GTGGTGTGTG AAAGCGAAGA GGCGGCGGGG CGCGTATTGG GTCAACTGAA AGCCACGGTT
CGCCGCAACT ATTCCAGCCC GCCGAACTTC GGTGCGCAGG TGGTGGCGAA GGTGCTGAAC
GATACGCAAC TGAAAGCCCA GTGGCTGGCA GAAGTGGAAA TCATGCGTAC CCGCATCCTT
GAGATGCGCA AAACGCTGGT GGAAGCTCTG AAGGTTGCTC TGCCGCAGCG TAACTTCGAT
TACCTGCTGG AACAGCGCGG TATGTTCAGC TACACCGGTT TCAGCGCGGC ACAGGTCGAT
CGCCTGCGTG AAGAGTTCGG TGTGTACCTG ATCCACAGCG GCCGTGTCTG CATGGCCGGC
CTGAACCATA ACAACGTGCA TCAGGTGGCC GAGGCGTTTG CCGCAGTGCA ATAA
 
Protein sequence
MFQNVDAYAG DPILSLMEKF KKDPRSHKVN LSIGLYYDEQ GIIPQMKAVA AAEAQLSSVD 
HGASVYLPME GLQPYRIAIQ HLLFGAEHPM LQQERIATIQ TVGGSGALKV GADFLKSYFP
DSQVWVSDPT WENHIAIFGG AGFKVNTYPY FDSESLGVKF DAMLSALKQL PKHSIALLHP
CCHNPTGSDL THAQWDEVVK VIAERELIPF LDIAYQGFGG GIADDAYAIR TMAAAGLPCL
VSNSFSKIFS LYGERVGGLS VVCESEEAAG RVLGQLKATV RRNYSSPPNF GAQVVAKVLN
DTQLKAQWLA EVEIMRTRIL EMRKTLVEAL KVALPQRNFD YLLEQRGMFS YTGFSAAQVD
RLREEFGVYL IHSGRVCMAG LNHNNVHQVA EAFAAVQ