Gene Spro_4430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4430 
Symbol 
ID5603920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4902376 
End bp4904025 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content58% 
IMG OID640939992 
ProductNa+/H+ antiporter 
Protein accessionYP_001480652 
Protein GI157372663 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.470814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCT TTTTTACAAT CCTCATTTTA ATTTTGGTGG TCTCCCTGTC CGGGGTGGTG 
ACGCGCATGT TGCCGTTCCA GGTGCCATTA CCGTTAATGC AGATCGGTAT CGGGGCCTTG
TTGGCCTGGC CGCATTTTGG GCTGCACGTC GACTTTGACC CTGAATTGTT CCTGGTCCTG
TTTATTCCGC CGTTGCTGTT TGCCGATGGC TGGAAAACGC CAACCCGTGA GTTTTTGCAC
CACGGCCGTG AAATCCTTGG TCTGGCACTG GTGCTGGTGC TGATTACCGT CGTCGGTGTC
GGCTACCTGA TTTACGCCAT GGTACCGGGC ATCCCGCTGG TGGCGGCGTT TGCCCTGGCG
GCGGTACTGT CGCCAACCGA TGCCGTGGCG CTGTCCGGCA TCGTGGGTAA AGGGCGTATT
CCCAAGTCGA TCATGGGGGT GCTGGAAGGT GAGGCGCTGA TGAACGACGC GTCCGGTCTG
GTCTCACTCA AATTCGCCAT CGCAGTGGCG ATGGGCACCA TGGTGTTTAC CGTGGGCGGA
GCGACGCTGG AGTTTCTCAA GGTGGCGATC GGCGGCCTGC TGGCCGGTGT GGCGATCACC
TGGCTTTACA GTAAGTCGTT GCGCGTCATG AGCCGCTGGA GTGGCGACGA CCCGGCAACG
CAAATTGTAT TCCTGCTGCT GTTGCCGTTT GCCTCTTATC TGATTGCCGA ACATATTGGC
GTCTCCGGCA TCCTGGCCGC GGTTGCTGCG GGGATGACCA TCAGCCAGTC CGGCGTGATC
CGCAATGCCC CGCTGGCGAT GCGTCTGCGT GCCAACAGCG TCTGGGCGAT GCTGGAATTT
GTGTTTAACG GCATGGTGTT CATCATGTTG GGGCTGCAGC TGCCGGGGAT CCTGGAGACC
TCCATCTTCC AGGCGGAGCT GGATCCGACC ATTCAGACCT GGTACCTGTT TGCCGATGTT
GCCATCATCT ACGCCGCGTT GCTGGTGTTG CGCTTCACCT GGCTGTGGCT GATGAAAAAC
GCCAGCCGTC GCTTTATGAA AAAACGGCCG TTGCAGTTTG GCGATTTCAC CACGCGTGAA
CTGTGGGTGG CGTCGTTCGC CGGGGTGCGT GGGGCGATTA CGCTGGCGGG TGTGCTGTCC
ATTCCGCTGT TGCTGAGTGA CGGTTCTGCC TTCCCGGCGC GCTATCAACT GGTGTTTATC
GCCGCCGGAG TGATCCTGCT TTCGCTGATT GCCGGCGTCA TGGCGTTGCC GCTGTTGCTG
CGCGGCGTGC AGGTGGCAGA CAAGAGCGTC AGCAAGAGTG AAGAGCGGAT GGCGATTGCC
ATGGCGGCCG AAGTGGCGAT CGAAAGCATC AACAAAATGG AAGAACGCCT GGCCGTGGAT
ACCGAGGAAA ATATCGATCC GCAGATATTG AAAGAGATCA GTTCGCGGGT GGTCGGGACG
CTGCGGCGGC GCATCACCAC TAAAGACGAT ATCGAAAATG CGCTGATGCT GGAAAACCTC
GAACGGCGTT TTCGCCTGAC GGCGCTGCGT GCCGAACGCG GTGAGTTATA TCACCTGCGC
GCCACGCAGA AAATCAGCAA CGAGACGCTG CAAAAATTAT TGCACGATCT CGACCTGCTG
GAAGCGCTGT TGATAGAGCG CGAGGGGTAA
 
Protein sequence
MEIFFTILIL ILVVSLSGVV TRMLPFQVPL PLMQIGIGAL LAWPHFGLHV DFDPELFLVL 
FIPPLLFADG WKTPTREFLH HGREILGLAL VLVLITVVGV GYLIYAMVPG IPLVAAFALA
AVLSPTDAVA LSGIVGKGRI PKSIMGVLEG EALMNDASGL VSLKFAIAVA MGTMVFTVGG
ATLEFLKVAI GGLLAGVAIT WLYSKSLRVM SRWSGDDPAT QIVFLLLLPF ASYLIAEHIG
VSGILAAVAA GMTISQSGVI RNAPLAMRLR ANSVWAMLEF VFNGMVFIML GLQLPGILET
SIFQAELDPT IQTWYLFADV AIIYAALLVL RFTWLWLMKN ASRRFMKKRP LQFGDFTTRE
LWVASFAGVR GAITLAGVLS IPLLLSDGSA FPARYQLVFI AAGVILLSLI AGVMALPLLL
RGVQVADKSV SKSEERMAIA MAAEVAIESI NKMEERLAVD TEENIDPQIL KEISSRVVGT
LRRRITTKDD IENALMLENL ERRFRLTALR AERGELYHLR ATQKISNETL QKLLHDLDLL
EALLIEREG