Gene Spro_4428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4428 
Symbol 
ID5603918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4900897 
End bp4901319 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content58% 
IMG OID640939990 
ProductLrgA family protein 
Protein accessionYP_001480650 
Protein GI157372661 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.29138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.409385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACTGG CGTTACGCCA CGCTGCTCCT TCTTTGCTGA CCCGCTTGCA GGTGCCTGTC 
CAGGTTGTTT TATACGCGGC GTTATTTTTG ATTGCTGACC GGCTGGTGCA GCAGTTCCAT
TTGCCGTTGC CCGCCAACAT TATCGGCATG TTGATGCTGC TGGCGCTGAT TTCGCTGCGC
ATTCTGCCGC TGAACTGGGT CAGGGCCGGT TCGCGCTGGC TGCTGGCCGA GATGCTGCTG
TTCTTCGTCC CGGCGGTAGT GGCGGTGGTC AACTATGCCC AGTTGCTGAT GGTTGAGGGC
TGGAAGATTT TCCTGGTGAT TGCCGTCAGC ACCACGCTGA CGTTGGCCGC AACGGGGCTG
GTGGTCGACC GGGTCTATCG ACTGGAAGTC TGGTTACAAC GGCGAAAACA GCGCGATGAA
TGA
 
Protein sequence
MLLALRHAAP SLLTRLQVPV QVVLYAALFL IADRLVQQFH LPLPANIIGM LMLLALISLR 
ILPLNWVRAG SRWLLAEMLL FFVPAVVAVV NYAQLLMVEG WKIFLVIAVS TTLTLAATGL
VVDRVYRLEV WLQRRKQRDE