Gene Spro_4425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4425 
Symbol 
ID5603853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4898427 
End bp4899347 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content57% 
IMG OID640939987 
Productlipid A biosynthesis palmitoleoyl acyltransferase 
Protein accessionYP_001480647 
Protein GI157372658 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00123056 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTC CGCAAAAATT CAAAATGGCC CTGCTACATC CTCGCTACTG GTTTACCTGG 
TTCGGGCTGG GCTGTTTGTT CTTACTGGTT CAACTCCCCT ATCCGGTGCT GCACAAGCTC
GGTATATGGA TGGGCCGCAC CTCGATGCGC TTCCTGAAAC GCCGCGTTTC CATTACTCGC
CGTAACCTGG AACTTTGCTT CCCGGACATG GACGTGGAAC AGCGCGAACG CAAAGTGACA
GGTAACTTCG AATCCCTCGG CATGGGCCTG CTGGAAACCG GTATGGCCTG GTTCTGGTCA
GATAAGCGCG TTAAGCGCTG GTTCAACGTT TCCGGCATCA ATCACCTGAA AGCGGCACAG
CAAAACCAAC GCGGCGTACT GGTAATTGGC GTGCATTTTA TGTCGCTGGA GCTGGGTGGT
CGTGCCATGG GGCTGTGCCA GCCGATGATG GCGATGTACC GTCCACACAA CAATAAAGCG
ATGGAATGGG CACAAACCAA AGGGCGTATG CGTTCCAACA AGGCCATGCT GGATCGCAAA
GACCTGCGCG GCATGGTTCA GGCTCTTAAG CGCGGCGAAG CCGTATGGTT CGCTCCGGAT
CAAGACTACG GCCCACGCGG CAGCGTATTC GCCCCGTTGT TCGCCGTCGA TCAGGCCGCC
ACCACCAGCG GGACCTATAT GCTGGCACGC ATGGCCAAGC CGGCGCTGGT ACCGGTGGTG
CTGATCCGTC GCGAGAAAGG CCGTGGTTAT GATCTATTGA TCCAACCGGC ACTGGAAAAT
TACCCTATCA GTGACGAAAT CGCCGCCGCG GCTTACATGA ATAAAGTGGT TGAGAAAGAG
ATCATGCGCG CTCCAGAGCA GTATATGTGG CTGCATCGTC GCTTCAAAAC CCGGCCGGCC
GGTACCCCTT CGCTGTACTG A
 
Protein sequence
MKRPQKFKMA LLHPRYWFTW FGLGCLFLLV QLPYPVLHKL GIWMGRTSMR FLKRRVSITR 
RNLELCFPDM DVEQRERKVT GNFESLGMGL LETGMAWFWS DKRVKRWFNV SGINHLKAAQ
QNQRGVLVIG VHFMSLELGG RAMGLCQPMM AMYRPHNNKA MEWAQTKGRM RSNKAMLDRK
DLRGMVQALK RGEAVWFAPD QDYGPRGSVF APLFAVDQAA TTSGTYMLAR MAKPALVPVV
LIRREKGRGY DLLIQPALEN YPISDEIAAA AYMNKVVEKE IMRAPEQYMW LHRRFKTRPA
GTPSLY