Gene Spro_4420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4420 
SymbolpanF 
ID5606334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4893140 
End bp4894585 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content59% 
IMG OID640939982 
Productsodium/panthothenate symporter 
Protein accessionYP_001480642 
Protein GI157372653 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4145] Na+/panthothenate symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family
[TIGR02119] sodium/pantothenate symporter 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0607009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACTG AAGTTATTTT GCCGCTGGTT GCCTATCTGC TGCTGGTATT TGGGCTGTCG 
GTTTACGCCT ACAGTCGGCG TCAGACCGGT AATTTCCTCA GCGAATACTT CCTGGGTAGC
CGATCGATGG GTGGCTTTGT GCTGGCGATG ACGCTGACCG CAACCTATAT CAGCGCCAGT
TCGTTTATCG GTGGCCCCGG TGCCGCCTAT AAATATGGCC TTGGTTGGGT GTTGTTGGCG
ATGATCCAAC TGCCCGCCGT ATGGTTATCG CTCGGTGTGC TGGGCAAGAA ATTCGCCATT
CTGGCGCGCC GCTACAACGC CATCACCTTA AACGACATGC TGTACGGGCG CTATCAAAGC
CGCCTGTTGG TCTGGCTAGC CAGTCTCAGT TTGTTGGTGG CGTTCCTGGG GGCCATGACG
GTGCAGTTTA TCGGCGGCGC ACGCCTGCTG GAAACCGCTG CCGGCATCCC TTACGACACC
GGCCTGCTGA TCTTTGGCGT CAGCATCGCG CTGTATACCG CCTTTGGCGG CTTTCGTGCC
AGCGTGCTGA ACGATGCCAT GCAGGGCCTG GTCATGTTGA TCGGCACCGT GCTGTTGCTG
GTGGCGGTGA TCCACGCCGC TGGCGGCCTG CACAGCGCGG TGGACAAACT CCACCAAATT
GACCCGGCGC TGGTGTCCCC CCAGGGCGGT GAACAGATCC TCAGCCTGCC ATTTATGGCC
TCGTTTTGGA TCCTGGTGTG CTTTGGCGTG ATAGGCCTGC CGCATACTGC GGTGCGCTGC
ATCTCTTACA AAGACAGCAA AGCGGTACAC CGCGGCATCA TCCTCGGTAC CATGGTAGTG
GCAGTGCTGA TGTTCGGTAT GCATCTGGCC GGTGCGCTGG GCCGCGCGGT GTTGCCGGAT
CTGAAGATCC CCGATCAGGT GATCCCGACG CTGATGATCA CCGTGCTGCC GCCGTATGCT
GCCGGCATCT TCCTGGCAGC ACCGATGGCG GCCATCATGT CGACCATTAA TGCCCAACTG
CTGCAGTCTT CCGCCACTAT TATTAAAGAT CTCTACCTTG GCGTACGGCC GCAGCAGATG
CAGAACGAAC GCTTGATCAA ACGCTTTTCC AGCCTGACCA CCTTGATCCT CGGGCTTTTG
GTGCTGCTGG CGGCATGGCG TCCGCCGGAA ATGATCATCT GGCTAAACCT GCTGGCGTTC
GGCGGCCTGG AGGCGGTATT CCTGTGGCCG CTGGTGCTGG GCCTGTACTG GGAACGCGCC
AACGCACAGG GAGCGCTTAG CTCAATGGTG ACGGGTGCGG TATGCTATAC GCTATTGGCC
AGTTTTAATC TGCAACTGGC GGGGCTGCAC CCTATCGTGC CTTCACTGCT GCTTAGCCTG
CTGGCATTTT ATATCGGTAA CCTCGTCGGC GAAAAACGCC GGACGGCGTC ATCATTACCC
TCTTAA
 
Protein sequence
MQTEVILPLV AYLLLVFGLS VYAYSRRQTG NFLSEYFLGS RSMGGFVLAM TLTATYISAS 
SFIGGPGAAY KYGLGWVLLA MIQLPAVWLS LGVLGKKFAI LARRYNAITL NDMLYGRYQS
RLLVWLASLS LLVAFLGAMT VQFIGGARLL ETAAGIPYDT GLLIFGVSIA LYTAFGGFRA
SVLNDAMQGL VMLIGTVLLL VAVIHAAGGL HSAVDKLHQI DPALVSPQGG EQILSLPFMA
SFWILVCFGV IGLPHTAVRC ISYKDSKAVH RGIILGTMVV AVLMFGMHLA GALGRAVLPD
LKIPDQVIPT LMITVLPPYA AGIFLAAPMA AIMSTINAQL LQSSATIIKD LYLGVRPQQM
QNERLIKRFS SLTTLILGLL VLLAAWRPPE MIIWLNLLAF GGLEAVFLWP LVLGLYWERA
NAQGALSSMV TGAVCYTLLA SFNLQLAGLH PIVPSLLLSL LAFYIGNLVG EKRRTASSLP
S