| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4416 |
|---|
| Symbol | |
|---|
| ID | 5602964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4890458 |
|---|
| End bp | 4890910 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640939978 |
|---|
| Product | 3-dehydroquinate dehydratase |
|---|
| Protein accession | YP_001480638 |
|---|
| Protein GI | 157372649 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
|---|
| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0161291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATA AGTTTCACAT TTTGCTTCTG AACGGCCCCA ATCTGAATCT GCTGGGGACG
CGTGAGCCGG AGAAGTACGG CAGCACGACG CTAACAGAGA TTGTTAACGG ATTGGAAAAC
CAGGCATCCG CACTGGATAT TACCCTGAGC CATCTGCAGT CTAACGCTGA ACATGCGCTT
ATCGACTGCA TACATCAGGC ACGCGGCAAC ACAGATTTTA TTCTGATCAA CCCTGCCGCG
TTCACGCATA CCAGCGTGGC GCTGCGCGAT GCATTGCTGG CGGTGCAGAT CCCGTTTATC
GAGATCCACC TCTCCAACGT GCATGCCCGA GAGCCTTTCC GCCATCACTC CTACCTTTCC
GATATTGCGG TGGGTGTGAT TTGCGGCCTC GGCGCAGATG GCTACACATT TGCTTTACAG
GCAGCGGTTA ACCGTCTGTC GAAAACCCAC TAA
|
|---|
| Protein sequence | MADKFHILLL NGPNLNLLGT REPEKYGSTT LTEIVNGLEN QASALDITLS HLQSNAEHAL
IDCIHQARGN TDFILINPAA FTHTSVALRD ALLAVQIPFI EIHLSNVHAR EPFRHHSYLS
DIAVGVICGL GADGYTFALQ AAVNRLSKTH
|
|---|
| |