Gene Spro_4413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4413 
Symbol 
ID5605892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4887516 
End bp4888493 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content60% 
IMG OID640939975 
Productquinone oxidoreductase putative YhdH/YhfP 
Protein accessionYP_001480635 
Protein GI157372646 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00493012 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAC TGTTATTGGA ACAACAAGAC GATCAAACTC TGGCTCGCGT CAAAGATATC 
AACAGTGACC AACTGCCCGA CGGCGATGTC ACGGTAGACG TTAATTGGTC CAGCATTAAC
TATAAAGACG CGTTGGCGAT CACCGGCAAA GGCAAAATCG TGCGTAACTT CCCGATGGTG
CCAGGCATCG ACTTCGCCGG TACCGTGCGC CAAAGCCGCG ACGATCGTTT TAAAGAAGGC
CAAAGCGTGG TGCTTACCGG CTGGGGCGTG GGTGAAAACC ACTGGGGCGG CCTGGCCGAG
CAGGCGCGTG TCTCCGGGGA ATGGTTGGTG CCGTTGCCAA ACGGATTGGA TGAACGTAAA
GCGATGATCC TCGGTACCGC CGGCTTTACC GCCATGCTGT GCGTGATGGC GCTGGAAGAA
GGCGGCGTAC ATCCGGATGA CGGCGACATT TTGGTTACGG GTGCCAGCGG TGGCGTAGGC
AGCACGGCGG TCGCTATTCT GGCGGCGCTG GGTTATCACG TCACGGCCAT CAGCGGCCGT
GAAAGCAATA CCGACTACCT CAAAGCGCTC GGCGCCAAAG AAGTCCTGTC GCGTGACGGC
TATCTCGAAG CTCCGCGCCC ACTGGAAAAG CAACTGTGGG CCGGTGCGGT GGATACCGTC
GGCGACACTA TGCTGGCGCG GGTTTTGGCG CAAATGAACT ATAACGGCAC GGTCGCCGCC
TGTGGCCTGG CCGGTGGTTA TCACCTGCCG ACCACGGTGA TGCCATTTAT TTTGCGCAAT
GTTCGTTTGC AAGGGGTCGA CTCGGTGCAC ACCCCGTTGC ATCGCCGTCA AACCGCCTGG
GAGCGCCTGG CCGGTATCCT GCCGGACAGC TTCTACCAGC AAGCCACCCA GGAAATCACG
CTGGAGCAGG CACCGGCCAC GGCTGCCGCA CTGTTGGACA ACAAAGTTAC CGGCCGCACC
CTGGTAAAAA TCCGCTGA
 
Protein sequence
MRALLLEQQD DQTLARVKDI NSDQLPDGDV TVDVNWSSIN YKDALAITGK GKIVRNFPMV 
PGIDFAGTVR QSRDDRFKEG QSVVLTGWGV GENHWGGLAE QARVSGEWLV PLPNGLDERK
AMILGTAGFT AMLCVMALEE GGVHPDDGDI LVTGASGGVG STAVAILAAL GYHVTAISGR
ESNTDYLKAL GAKEVLSRDG YLEAPRPLEK QLWAGAVDTV GDTMLARVLA QMNYNGTVAA
CGLAGGYHLP TTVMPFILRN VRLQGVDSVH TPLHRRQTAW ERLAGILPDS FYQQATQEIT
LEQAPATAAA LLDNKVTGRT LVKIR