Gene Spro_4363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4363 
Symbol 
ID5604434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4833607 
End bp4834176 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content55% 
IMG OID640939925 
Product3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 
Protein accessionYP_001480585 
Protein GI157372596 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.132421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.162658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGA ACTCAATGAG TCTGGTTGAA ACCTGCTACG GGCCTGTAGA ACAAGACGTC 
ATGGCGCGCG CCGGTAAAAT CCGCCTGCTG ATTTGTGATG TCGATGGCGT GCTGTCAGAC
GGCCTGATTT TCATGGGCAA CAACGGTGAA GAACTAAAAG CGTTTAACGT GCGCGACGGT
TACGGCATTC GCTGCCTGAA AACCTCGGAT ATTGAAGTGG CAATTATTAC CGGCCGCTCC
GCCAAGCTGC TGGAGGACCG CGCAAATACC CTCGGTATTA CCCACCTTTA TCAGGGGCAA
TCCGATAAGC TTTTGGCCTT CCGCGAACTG TTGGATACAC TGTCGCTAAC GGCAGATCAG
GTAGCCTATA TCGGCGACGA TCTGATCGAC TGGCCGGTGA TGGCCCAGGT TGGCCTGGCA
GTCGCGGTAG CAGATGCACA TCCTCTGTTG TTGCCACGAG CCCACTATAT TACCCGCATT
GCCGGCGGCC GCGGTGCGGT GCGCGAGCTG TGTGACATTA TTCTTTTGGC TCAGAACAAG
CTGGAGGACG CCAAAGGGCT GTCGATATGA
 
Protein sequence
MEENSMSLVE TCYGPVEQDV MARAGKIRLL ICDVDGVLSD GLIFMGNNGE ELKAFNVRDG 
YGIRCLKTSD IEVAIITGRS AKLLEDRANT LGITHLYQGQ SDKLLAFREL LDTLSLTADQ
VAYIGDDLID WPVMAQVGLA VAVADAHPLL LPRAHYITRI AGGRGAVREL CDIILLAQNK
LEDAKGLSI