| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4333 |
|---|
| Symbol | |
|---|
| ID | 5606349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4800863 |
|---|
| End bp | 4801768 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640939894 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001480555 |
|---|
| Protein GI | 157372566 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.243305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGAG ATCGGGCGTT AACGCTTGAA GCGTTAAGGG TTATGGATGC GATTGACCGA
CGTGGCAGCT TCGCTGCGGC AGCCGATGAG CTGGGGCGCG TGCCTTCGGC GCTCAGCTAC
ACCATGCAAA AATTGGAAGA AGAATTGGAC GTGGTGCTGT TCGACCGCTC CGGGCACCGT
ACCAAGTTCA CCAACGTCGG ACGTATGCTG CTGGAGCGCG GACGGGTACT TCTGGAGGCG
GCAGACAAGC TGACCACCGA TGCCGAAGCG CTGGCACGCG GCTGGGAAAC TCACCTGACG
ATTGTCAGCG AGGCGCTATC ACCCCCGAGC AAACTGTTTC CGCTGGTCGA TAAACTCGCG
CTGAAGGCCA ATACCCAGGT GTCGATCTTG ACCGAAGTGC TGGCCGGTGC CTGGGAAAGG
CTGGAGCAGG GGCGAGCGGA TATTGTTATC GCTCCGGATA TGCATTTCCG CGCGTCGTCC
GAAATCAATA CGCGTAAGCT GTACAAGGTG ATGAGCGTGT ATGTGGCCGC ACCGGGTCAT
CCAATCCACC TGGAACCGGA GCCGCTGTCT GAAGTGACGC GCGTGAAGTA CCGCGGTATT
GCGGTCGCGG ATACCGCACG GGAACGCCCG GTACTGACGG TGCAATTGTT GGATAAACAG
CAGCGGCTAA CGGTCAGCAC CATTGAAGAC AAGCGCCTGG CTTTGCTGGC AGGGCTGGGT
GTGGCGACCA TGCCTTACCC GATGGTCGAG AAAGACATTG AAGAAGGGCG TCTGCGTGTT
GTGGGGCCGG AATACAGCCG CGAAGTTGAC ATCATTATGG CCTGGCGACG TGACAGCATG
GGTGAGGCAA AGGCTTGGTT CCTGCGCGAA ATTCCGCGTC TGTTTGCACA GTTGGAACGA
CAGTAA
|
|---|
| Protein sequence | MARDRALTLE ALRVMDAIDR RGSFAAAADE LGRVPSALSY TMQKLEEELD VVLFDRSGHR
TKFTNVGRML LERGRVLLEA ADKLTTDAEA LARGWETHLT IVSEALSPPS KLFPLVDKLA
LKANTQVSIL TEVLAGAWER LEQGRADIVI APDMHFRASS EINTRKLYKV MSVYVAAPGH
PIHLEPEPLS EVTRVKYRGI AVADTARERP VLTVQLLDKQ QRLTVSTIED KRLALLAGLG
VATMPYPMVE KDIEEGRLRV VGPEYSREVD IIMAWRRDSM GEAKAWFLRE IPRLFAQLER
Q
|
|---|
| |