| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4286 |
|---|
| Symbol | ribB |
|---|
| ID | 5604728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4750636 |
|---|
| End bp | 4751289 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640939846 |
|---|
| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| Protein accession | YP_001480508 |
|---|
| Protein GI | 157372519 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGA CCCTACTTTC AGATTTCGGC ACGCCGGTAG AACGCGTAGA ACGCGCTCTT
GAAGCATTGC GCAATGGGCG CGGTGTGATG GTGCTCGATG ATGAAAATCG TGAAAACGAA
GGTGATATGA TCTTCGCCGC AGAAACCATG ACCGTTGAGC AGATGGCGCT GACCATTCGC
CACGGTAGCG GTATTGTGTG CCTGTGTCTC ACCGAAGAAC GCCGTCAGCA GCTTGAACTG
CCGATGATGG TGACCAACAA CTCCAGCCAG TTCCAGACCG CCTTCACCGT GACTATCGAA
GCGGCGCAGG GTGTGACGAC CGGTGTTTCC GCGTCCGATC GCCTGACCAC CATTCGCGCG
GCGGTAGCCG ATAACGCCAA GCCGAGCGAT CTGAATCGTC CTGGCCACGT GTTCCCACTG
CGTGCGCAGC CGGGTGGCGT CCTGAGCCGT CGTGGCCATA CCGAAGCGAC TATCGATTTG
GTATCGATGG CCGGTTTCAA ACCTGCCGGC GTGCTGTGTG AACTGACCAA CGATGACGGC
AGCATGGCGC ATGCGCCAGA AGTTATCCTG TTCGCCAAAC AGCATGATAT GACCGTACTG
ACCATCGAAG ATCTGGTGGC CTACCGCCAG GCTCACGAAC AGAAAGCCAG CTGA
|
|---|
| Protein sequence | MNQTLLSDFG TPVERVERAL EALRNGRGVM VLDDENRENE GDMIFAAETM TVEQMALTIR
HGSGIVCLCL TEERRQQLEL PMMVTNNSSQ FQTAFTVTIE AAQGVTTGVS ASDRLTTIRA
AVADNAKPSD LNRPGHVFPL RAQPGGVLSR RGHTEATIDL VSMAGFKPAG VLCELTNDDG
SMAHAPEVIL FAKQHDMTVL TIEDLVAYRQ AHEQKAS
|
|---|
| |