| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4282 |
|---|
| Symbol | |
|---|
| ID | 5604811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4745792 |
|---|
| End bp | 4747588 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640939842 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001480504 |
|---|
| Protein GI | 157372515 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1482] Phosphomannose isomerase |
|---|
| TIGRFAM ID | [TIGR00218] mannose-6-phosphate isomerase, class I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATTCAG TTCATAGGCA GAAGAATATG ACACAGCAAC AGCATAAATC AACAAGCTAT
GACAAGTCTC CGGAAGTGGC AGTGCAGGGA TTTGATCATG CCGCCTGGCA GGGCTGGCAG
GCAGTGGCCG CCGCCGTCAG CCACAAGATT GCCACTCTTG GGTTGCGCAA AACCCTGTTG
GTGGTGGATT GCTACCATGG GGTGAGCCTG GCAGAGCTAA CCGAGAATTT TATTCATCCT
CTGCAACCGG TCAGTAGCAT CAACGCCGAG TCGGCTAAAT ACGATGAGCC GCACATCCAC
GCGATGATTG AGCGCAATTT AACGGATGAC CGTGTTTTTG GCGTGCTGTC GTGCCATGAA
ATGCCCGAGT TTTTTGATGC CGAGCGCGTC CAGCAGTTGC GCGATCAAAT TGCGAGCGTA
GACAGTGGGC TGGTGGTGGT TTACGGGCCG GGCGCGGCGC TGATCGCCGA AGCCGATGTG
CTGGTGTATG CCGATATGGC CCGCTGGGAA ATACAGCAGC GTTTCCGTCG CGGCGAACTG
GGCAACTGGG GGGTGAATAA TGTGGACGAA GATGTGCTGC GCCGTTACAA GCGGGCATTC
TTCGTGGAAT GGCGAGTCTT CGACCGTCAT AAAACCCCGT TGCTGCAGCG TGCCGATTTT
GTGTTGGATA CCAATCAGGC CGGTCAACCC AAGCTGGTGA CCGGTACGGC TTTCCACGCC
GGATTGCAGC AGGCAACCCA ACGCCCATTC CGCGTGGTGC CTTTTTTTGA CCCTGGCATT
TGGGGTGGCC AGTGGATGAA ACAACAGTTC GATCTCGACC CGACGGCAGC CAACTACGCA
TGGTGTTTTG ACTGCGTGCC CGAGGAAAAC AGCCTGCTAA TGCGTTTTGG TGACGTTCGG
GTCGAGATCC CCTCACAGGA TTTGGTGCTG TTATATCCCC GCCCCTTGCT GGGTGAGCAG
GTGCATGCCC GCTTCGGCGC CGAATTCCCG ATCCGCTTTG ACCTGCTCGA TACCGTCGGT
GGGCAAAATC TCAGTTTCCA GGTGCACCCG CTGACGGAAT ACATCCAACA GCATTTCGGC
ATGCACTACA CCCAGGATGA AAGCTATTAC ATTCTGGCGG CAGAGCCGGG GGCTGAGGTG
TACCTGGGAG TGAAAAACGG CACCGAACCG CAGGCGATGA TGGCCGATCT GGCCGCTGCC
CAAAGCGGTG AAAAGCCCTT CGATGACCAG CGTTTTGTTA ATCGTTTTCC GGCGCGTAAA
CACGACCATT TCCTGATCCC TGCGGGGACG GTGCACTGTT CCGGCTCCGG CTCCATGGTG
CTGGAGATCA GCGCGACGCC ATATATTTTC ACCTTCAAAC TGTGGGACTG GGGCCGCCTG
GGGTTGGATG GTCAGCCACG CCCGGTGCAT CTGCAGCATG GCGAACAGGT GATCAACTGG
CAGTGCGACA CCACCTGGGC GAAGGAGCAC CTGGTGAACC GTATTGATCA GGTTGCCGAA
GGGGCTGGCT GGCAGGAAGA GCGAACCGGT TTGCACGAGC GCGAATTTAT CGAAACCCGT
CGTCACTGGT TCAGTGAACC TGTGCTGCAC CATACCGAAG GCCGGGTGAA CGTACTGAAT
TTGGTTGAAG GGGAAGAGGC GGTAGTCGAA AGCCCTGAGG GCCATTTCGC GCCCTTTGTG
GTGCATTACG CCGAAACCTT TATCGTTCCG GCCGCCGTGG GGCCATACCG TATCAGCCCC
CATGGTCGCA GCCTGGGCAA GACCCTGGGC ACCATCAAAG CCTGGGTAAG GGGATAA
|
|---|
| Protein sequence | MYSVHRQKNM TQQQHKSTSY DKSPEVAVQG FDHAAWQGWQ AVAAAVSHKI ATLGLRKTLL
VVDCYHGVSL AELTENFIHP LQPVSSINAE SAKYDEPHIH AMIERNLTDD RVFGVLSCHE
MPEFFDAERV QQLRDQIASV DSGLVVVYGP GAALIAEADV LVYADMARWE IQQRFRRGEL
GNWGVNNVDE DVLRRYKRAF FVEWRVFDRH KTPLLQRADF VLDTNQAGQP KLVTGTAFHA
GLQQATQRPF RVVPFFDPGI WGGQWMKQQF DLDPTAANYA WCFDCVPEEN SLLMRFGDVR
VEIPSQDLVL LYPRPLLGEQ VHARFGAEFP IRFDLLDTVG GQNLSFQVHP LTEYIQQHFG
MHYTQDESYY ILAAEPGAEV YLGVKNGTEP QAMMADLAAA QSGEKPFDDQ RFVNRFPARK
HDHFLIPAGT VHCSGSGSMV LEISATPYIF TFKLWDWGRL GLDGQPRPVH LQHGEQVINW
QCDTTWAKEH LVNRIDQVAE GAGWQEERTG LHEREFIETR RHWFSEPVLH HTEGRVNVLN
LVEGEEAVVE SPEGHFAPFV VHYAETFIVP AAVGPYRISP HGRSLGKTLG TIKAWVRG
|
|---|
| |