| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4268 |
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| Symbol | tolC |
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| ID | 5605408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 4731421 |
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| End bp | 4732914 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640939828 |
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| Product | outer membrane channel protein |
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| Protein accession | YP_001480490 |
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| Protein GI | 157372501 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0102816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC TGCTCCCCCT TCTTATCGGA CTGAGCCTGG GCGGCTTCAG TGCAATGAGC
CAGGCAGAGA ACCTGCTGCA GGTCTACAAA CAGGCCAGGG AAAGTAACCC GGATCTGCGC
AAAACCGCCG CTGACCGTGA CGCCGCATTC GAAAAAATCA ACGAAGCACG CAGCCCGTTG
CTGCCGCAGT TGGGTTTGAG CGCCGGTTAC ACTTACACCA ATGGCTACCG TGACAGCAAA
GATGCCAACA GCGATGCCAC CAGTGGCTCC CTGGCGTTGA CCCAGACTAT CTTCGACATG
TCCAAATGGC GTGCGCTGAC GCTGCAGGAA AAAACCGCCG GCATTTCCGA CGTGACTTTC
CAAACCTCGT CACAGCAGCT GATCCTCGAT ACCGCTACCG CCTATTTTAA CGTGCTGAGC
GCCATCGATA CGCTGTCCTA CACCCAGGCG AACAAGCAAG CGGTTTACCG CACCCTGGAC
CAGACCACCC AACGCTTTAA CGTGGGCCTG GTCGCGATCA CCGACGTGCA AAACGCCCGT
TCGTCCTACG ATACCGTGCT GGCGGCCGAA GTCACCGCCC GTAACAACCT GGACAACGCG
CTGGAAAAAC TGCGCCAGGT CACCGGCACC TTCTATCCGG AACTGGCCTC GTTGAATACC
GACCGTTTCA ACACCAAACG CCCGGATGCA GTCAATAATC TGCTGAAAGA AGCCGAAAGC
CGTAACCTGA GCCTGTTGTC CGCTCGCCTG AGCCAGGATC TGGCCCGTGA GCAGATCCGT
TCCGCACAGA CCGGTTATAT GCCTACCGTT GATTTCAGCG CATCCACTGC GGTGAGCAAT
ACTAATTACA GCGGTTCTCG CAACGTGAAC AACGACGCTG ATATTGGTCA GAACAAAGTG
GGCCTGAGCT TTAACTTGCC GTTGTACAGC GGCGGCCAGA CCAACTCACA GGTGCAGCAG
GCGCAGTACA ACTTCGTTGG CGCCAGTGAG CAACTGGAAA GCGCCCACCG CAGCGTAGTG
CAGACCGTGC GTTCTTCGTT CAATAACGTG AATGCCTCGA TCAGCAGCAT CAACGCCTAC
CAACAAGCGG TAGTGTCTGC CCAGAGTTCA TTGGATGCGA CCGAGGCCGG TTACCAGGTA
GGTACCCGTA CCATCGTCGA CGTGCTGGAT GCGACCAGTA CGCTGTATAA CGCCAAGCAA
CAGCTCTCCA GCGCGCGTTA TACCTACCTG ATCAACCAAC TGAACATCAA GTCGGCGCTC
GGTACCCTGA ACGAGAACGA TCTGATGATG CTGAATGGCG CATTGGGTAA ACCGATTTCT
ACTTCGCAAG ACGTGGTAGC GCCACCGACT ACCGCACAGG ACGCTTACGC TGAAGGCTAT
AACGGCAACG CCCCTGCGCC ACAAACTGCA GCACCGGTTG CCACCCGCGC CTCCGCACCG
GCGGCCACCA CCAGCCAGCC TGCACGCACC AGCGGTAATC CATTCCGTAA TTGA
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| Protein sequence | MKKLLPLLIG LSLGGFSAMS QAENLLQVYK QARESNPDLR KTAADRDAAF EKINEARSPL
LPQLGLSAGY TYTNGYRDSK DANSDATSGS LALTQTIFDM SKWRALTLQE KTAGISDVTF
QTSSQQLILD TATAYFNVLS AIDTLSYTQA NKQAVYRTLD QTTQRFNVGL VAITDVQNAR
SSYDTVLAAE VTARNNLDNA LEKLRQVTGT FYPELASLNT DRFNTKRPDA VNNLLKEAES
RNLSLLSARL SQDLAREQIR SAQTGYMPTV DFSASTAVSN TNYSGSRNVN NDADIGQNKV
GLSFNLPLYS GGQTNSQVQQ AQYNFVGASE QLESAHRSVV QTVRSSFNNV NASISSINAY
QQAVVSAQSS LDATEAGYQV GTRTIVDVLD ATSTLYNAKQ QLSSARYTYL INQLNIKSAL
GTLNENDLMM LNGALGKPIS TSQDVVAPPT TAQDAYAEGY NGNAPAPQTA APVATRASAP
AATTSQPART SGNPFRN
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